RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 LILRA5A6NI73 299 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 C2orf81A6NN90 581 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 ATXN7O15265 892 aaPredicted RBP30.86■■■□□ 2.53
LDB1-204ENST00000490751 VCLP18206 1134 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 XRCC1P18887 633 aaPredicted RBP30.86■■■□□ 2.53
LDB1-204ENST00000490751 KLF1Q13351 362 aaPredicted RBP30.86■■■□□ 2.53
LDB1-204ENST00000490751 SNAP47Q5SQN1 464 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 TRIM48Q8IWZ4 208 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 RASGEF1AQ8N9B8 481 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 OR4K2Q8NGD2 314 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 SNRNP27Q8WVK2 155 aaKnown RBP30.86■■■□□ 2.53
LDB1-204ENST00000490751 HES6Q96HZ4 224 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 B3GNT4Q9C0J1 378 aa30.86■■■□□ 2.53
LDB1-204ENST00000490751 ZNF624Q9P2J8 865 aaPredicted RBP30.86■■■□□ 2.53
LDB1-204ENST00000490751 C5orf60A6NFR6 353 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 K7ENP7 123 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 PRAMEF1O95521 474 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 VIPP01282 170 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 IDSP22304 550 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 RPL10P27635 214 aaKnown RBP30.85■■■□□ 2.53
LDB1-204ENST00000490751 SLC19A1P41440 591 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 INO80CQ6PI98 192 aaPredicted RBP30.85■■■□□ 2.53
LDB1-204ENST00000490751 ABRAXAS1Q6UWZ7 409 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 CCDC112Q8NEF3 446 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 PMEPA1Q969W9 287 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 TAAR9Q96RI9 348 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 TBL1YQ9BQ87 522 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 SMOXQ9NWM0 555 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 R3HDM2Q9Y2K5 976 aaKnown RBP30.85■■■□□ 2.53
LDB1-204ENST00000490751 KCTD3Q9Y597 815 aa30.85■■■□□ 2.53
LDB1-204ENST00000490751 MGAQ8IWI9 3026 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 A8MU76 341 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 BRAFP15056 766 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 CTSCP53634 463 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 DRG2P55039 364 aaKnown RBP30.84■■■□□ 2.53
LDB1-204ENST00000490751 SPARCL1Q14515 664 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 WASH2PQ6VEQ5 465 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 ARHGEF18Q6ZSZ5 1173 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 TMEM26Q6ZUK4 368 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 RNF10Q8N5U6 811 aaKnown RBP30.84■■■□□ 2.53
LDB1-204ENST00000490751 FAM71DQ8N9W8 422 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 ZNF398Q8TD17 642 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 EPB41L1Q9H4G0 881 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 UCK1Q9HA47 277 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 WASH6PQ9NQA3 447 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 OCIAD1Q9NX40 245 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 FKBPLQ9UIM3 349 aa30.84■■■□□ 2.53
LDB1-204ENST00000490751 SMG1Q96Q15 3661 aaKnown RBP30.84■■■□□ 2.53
LDB1-204ENST00000490751 TCRBV7S2A1N4TA0A589 114 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 CD82P27701 267 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 AGAP9Q5VTM2 703 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 FAM129CQ86XR2 697 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 KLHDC8BQ8IXV7 354 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 SLC39A7Q92504 469 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 ART4Q93070 314 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 POT1Q9NUX5 634 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 PCDHGA3Q9Y5H0 932 aa30.83■■■□□ 2.53
LDB1-204ENST00000490751 SDK2Q58EX2 2172 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 OR2AG2A6NM03 316 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 OR52A4PA6NMU1 304 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 EFCAB7A8K855 629 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 POP7O75817 140 aaKnown RBP30.82■■■□□ 2.52
LDB1-204ENST00000490751 CRTAMO95727 393 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 AKT1P31749 480 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 RHDQ02161 417 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 SRSF6Q13247 344 aaKnown RBP30.82■■■□□ 2.52
LDB1-204ENST00000490751 MSLNQ13421 630 aaPredicted RBP30.82■■■□□ 2.52
LDB1-204ENST00000490751 DENND5AQ6IQ26 1287 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 TMEM220Q6QAJ8 160 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 ARHGAP22Q7Z5H3 698 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 AMZ2Q86W34 360 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 SLC35B2Q8TB61 432 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 LRRC45Q96CN5 670 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 ASB8Q9H765 288 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 KLHL3Q9UH77 587 aa30.82■■■□□ 2.52
LDB1-204ENST00000490751 ERVH48-1M5A8F1 160 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 EFSO43281 561 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 KCNJ13O60928 360 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 SRP72O76094 671 aaKnown RBP30.81■■■□□ 2.52
LDB1-204ENST00000490751 MSH3P20585 1137 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 ARSDP51689 593 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 PARP6Q2NL67 630 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 DTX1Q86Y01 620 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 OR13C4Q8NGS5 318 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 CXorf40BQ96DE9 158 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 TSGA10Q9BZW7 698 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 ARNT2Q9HBZ2 717 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 SLC39A1Q9NY26 324 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 WDR37Q9Y2I8 494 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 PCDHB11Q9Y5F2 797 aa30.81■■■□□ 2.52
LDB1-204ENST00000490751 B4E171 279 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 IQCJ-SCHIP1C9J366 451 aaPredicted RBP30.8■■■□□ 2.52
LDB1-204ENST00000490751 METTL18O95568 372 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 TSPAN7P41732 249 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 GDF10P55107 478 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 GSDMDP57764 484 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 PDE1BQ01064 536 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 DMPKQ09013 629 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 COL9A2Q14055 689 aaPredicted RBP30.8■■■□□ 2.52
LDB1-204ENST00000490751 LONRF2Q1L5Z9 754 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms