RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GJB7Q6PEY0 223 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 DEF8Q6ZN54 512 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TDRPQ86YL5 185 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 UNC5CLQ8IV45 518 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF595Q8IYB9 648 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 UXS1Q8NBZ7 420 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 OCC1Q8TAD7 63 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM110DQ8TAY7 271 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 GRAPLQ8TC17 118 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 NSMCE1Q8WV22 266 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC13A3Q8WWT9 602 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 POMGNT1Q8WZA1 660 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 DTNBP1Q96EV8 351 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PGAM5Q96HS1 289 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF668Q96K58 619 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF558Q96NG5 402 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM111AQ96PZ2 611 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 EIF3CQ99613 913 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SH3GL2Q99962 352 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 EDEM2Q9BV94 578 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 C1QTNF5Q9BXJ0 243 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 P2RY12Q9H244 342 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PLEKHA4Q9H4M7 779 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CNOT10Q9H9A5 744 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 KIF9Q9HAQ2 790 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC6A13Q9NSD5 602 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ABCB8Q9NUT2 735 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM153AQ9UHL3 310 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 AURKCQ9UQB9 309 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 R3HDM2Q9Y2K5 976 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ASB3Q9Y575 518 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 DEPDC5O75140 1603 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PRDM15P57071 1507 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 KDM5DQ9BY66 1539 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ERBINQ96RT1 1412 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ASTN2O75129 1339 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CFAP65Q6ZU64 1925 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CYP3A7-CYP3A51PA0A087WV96 503 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 A6NL46 340 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 H3BQ06 376 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PEX11AO75192 247 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 AVILO75366 819 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 DAB1O75553 588 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 LETM1O95202 739 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ZWINTO95229 277 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 KCNK5O95279 499 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ALPPP05187 535 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM225BP0DP42 221 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ALPPL2P10696 532 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 UROSP10746 265 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 NCF1P14598 390 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 RPS2P15880 293 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TCF4P15884 667 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF8P17098 575 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM11P17152 192 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ERCC2P18074 760 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ACHEP22303 614 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CYP3A7P24462 503 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TACR3P29371 465 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TYK2P29597 1187 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PRPHP41219 470 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 IFNAR2P48551 515 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PITPNBP48739 271 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CDH13P55290 713 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PTENP60484 403 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CCNA1P78396 465 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TXNL4AP83876 142 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 GOLGA8DPQ0D2H9 430 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PPIGQ13427 754 aaKnown RBP eCLIP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 GAB1Q13480 694 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 STIM1Q13586 685 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 IDI1Q13907 227 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 RPS6KA1Q15418 735 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 OASLQ15646 514 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TWIST1Q15672 202 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ST3GAL2Q16842 350 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 PFKFB3Q16875 520 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 RABL6Q3YEC7 729 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC9C1Q4G0N8 1177 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 LBHQ53QV2 105 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TXNDC8Q6A555 127 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CCDC73Q6ZRK6 1079 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ARMCX2Q7L311 632 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 RRM2BQ7LG56 351 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ADIPOR2Q86V24 386 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 IQCHQ86VS3 1027 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 NUDT13Q86X67 352 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ADGRF3Q8IZF5 1079 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 HDDC3Q8N4P3 179 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 IQUBQ8NA54 791 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC4A11Q8NBS3 891 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 GMCL1P1Q8NEA9 526 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ST6GALNAC6Q969X2 333 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 RAB7BQ96AH8 199 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM149B1Q96BN6 582 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CEP295NLQ96MC4 621 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 CFAP57Q96MR6 1250 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 ERP44Q9BS26 406 aa3.19□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC25A23Q9BV35 468 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms