RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 FAM107BQ9H098 131 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 SPATS2LQ9NUQ6 558 aaKnown RBP21.37■■□□□ 1.01
SMC4-221ENST00000489573 A0A1W2PQU0 124 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 PRR23AA6NEV1 266 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 QSOX1O00391 747 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 KLF11O14901 512 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ZBTB14O43829 449 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 MAGEC1O60732 1142 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 DRD4P21917 467 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TMEM259Q4ZIN3 620 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ZNF648Q5T619 568 aaPredicted RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 NEK5Q6P3R8 708 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ISCA2Q86U28 154 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FAM124AQ86V42 546 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 HORMAD1Q86X24 394 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ZBTB2Q8N680 514 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 C1QTNF2Q9BXJ5 285 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 OSBPL6Q9BZF3 934 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FOXQ1Q9C009 403 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ZCCHC2Q9C0B9 1178 aaKnown RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 NSRP1Q9H0G5 558 aaKnown RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 TFB2MQ9H5Q4 396 aaKnown RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 LATS2Q9NRM7 1088 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 KLHL42Q9P2K6 505 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3DA0A087WVF3 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3IA0A087WXS9 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3EA0A087X179 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3KA0A087X1G2 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3FA6NER0 549 aaPredicted RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 FAM170BA6NMN3 283 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3LB9A6J9 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TSPAN12O95859 305 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FAM107AO95990 144 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 PCCBP05166 539 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3HP0C7X1 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FGF3P11487 239 aaPredicted RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 TPMTP51580 245 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 SGCGQ13326 291 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FZD5Q13467 585 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 WSCD2Q2TBF2 565 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 MAP7D1Q3KQU3 841 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TTLL9Q3SXZ7 439 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ATG16L1Q676U5 607 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3GQ6DHY5 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3CQ6IPX1 549 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 PNCKQ6P2M8 343 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ADAMTSL4Q6UY14 1074 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D3Q8IZP1 549 aaPredicted RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 PPP1R14CQ8TAE6 165 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 BCAS4Q8TDM0 211 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 EEF1AKMT1Q8WVE0 214 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 SREK1Q8WXA9 508 aaKnown RBP21.36■■□□□ 1.01
SMC4-221ENST00000489573 PTERQ96BW5 349 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 CCT8L2Q96SF2 557 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 KDM4CQ9H3R0 1056 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 ALG9Q9H6U8 611 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 FGFR1OP2Q9NVK5 253 aa21.36■■□□□ 1.01
SMC4-221ENST00000489573 RGS4P49798 205 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 TMEM115Q12893 351 aaPredicted RBP21.35■■□□□ 1.01
SMC4-221ENST00000489573 FGL2Q14314 439 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 TRIM67Q6ZTA4 783 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 OTOAQ7RTW8 1153 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 CPLX4Q7Z7G2 160 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 RASGEF1AQ8N9B8 481 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 PLA2G15Q8NCC3 412 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 RHEBL1Q8TAI7 183 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 KIAA1191Q96A73 305 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 SGF29Q96ES7 293 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 C1QTNF7Q9BXJ2 289 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 CD93Q9NPY3 652 aa21.35■■□□□ 1.01
SMC4-221ENST00000489573 MBD1Q9UIS9 605 aaPredicted RBP21.35■■□□□ 1.01
SMC4-221ENST00000489573 SGTAO43765 313 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 FTH1P02794 183 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 DGKAP23743 735 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 TEAD1P28347 426 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 GAS6Q14393 721 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 FAM47EQ6ZV65 393 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 TRIM74Q86UV6 250 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 PGBD3Q8N328 593 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 TP53I13Q8NBR0 393 aaPredicted RBP21.34■■□□□ 1.01
SMC4-221ENST00000489573 PDLIM5Q96HC4 596 aaKnown RBP21.34■■□□□ 1.01
SMC4-221ENST00000489573 HIC2Q96JB3 615 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 COL25A1Q9BXS0 654 aaPredicted RBP21.34■■□□□ 1.01
SMC4-221ENST00000489573 SLC17A9Q9BYT1 436 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 TBC1D17Q9HA65 648 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 SLCO1B3Q9NPD5 702 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 OXSMQ9NWU1 459 aa21.34■■□□□ 1.01
SMC4-221ENST00000489573 USP36Q9P275 1121 aaKnown RBP21.34■■□□□ 1.01
SMC4-221ENST00000489573 CCDC189A1A4V9 331 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 OR2AG2A6NM03 316 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 DLX3O60479 287 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 TRIM13O60858 407 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 PAK4O96013 591 aaPredicted RBP21.33■■□□□ 1.01
SMC4-221ENST00000489573 SERPINE1P05121 402 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 ATP5F1P24539 256 aaPredicted RBP21.33■■□□□ 1.01
SMC4-221ENST00000489573 CCR7P32248 378 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 PRKAA2P54646 552 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 BST1Q10588 318 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 IRF4Q15306 451 aa21.33■■□□□ 1.01
SMC4-221ENST00000489573 OR4D1Q15615 310 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms