RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ENDOVQ8N8Q3 282 aaKnown RBP15.86■□□□□ 0.13
USP48-210ENST00000489108 CCHCR1Q8TD31 782 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 HSPH1Q92598 858 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 PCMTD1Q96MG8 357 aaPredicted RBP15.86■□□□□ 0.13
USP48-210ENST00000489108 SPATA16Q9BXB7 569 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 PCDH9Q9HC56 1237 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 SNX7Q9UNH6 387 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 SPTBP11277 2137 aa15.86■□□□□ 0.13
USP48-210ENST00000489108 GPR89AB7ZAQ6 455 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 F5H423 210 aaPredicted RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 KLK3P07288 261 aaPredicted RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 GPR89BP0CG08 455 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 TCF4P15884 667 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 CES1P23141 567 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 HNRNPH3P31942 346 aaKnown RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 ARL4DP49703 201 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 VAV2P52735 878 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 RPL26P61254 145 aaKnown RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 NIPAL4Q0D2K0 466 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 QPCTQ16769 361 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 PRAMEF17Q5VTA0 474 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 ALS2CLQ60I27 953 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 WASH2PQ6VEQ5 465 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 MED25Q71SY5 747 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 LRRTM4Q86VH4 590 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 ZNF547Q8IVP9 402 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 ZBTB2Q8N680 514 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 TMEM102Q8N9M5 508 aaPredicted RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 NEK11Q8NG66 645 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 ARRDC2Q8TBH0 407 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 EID2BQ96D98 161 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 TIMM29Q9BSF4 260 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 KCND1Q9NSA2 647 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 RBM22Q9NW64 420 aaKnown RBP eCLIP15.85■□□□□ 0.13
USP48-210ENST00000489108 TCFL5Q9UL49 500 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 RPL26L1Q9UNX3 145 aaKnown RBP15.85■□□□□ 0.13
USP48-210ENST00000489108 WDR37Q9Y2I8 494 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 TTLL3Q9Y4R7 772 aa15.85■□□□□ 0.13
USP48-210ENST00000489108 PCSK5Q92824 1860 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 POLEQ07864 2286 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 MTX2O75431 263 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 RAB40ALP0C0E4 278 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 ATP1A3P13637 1013 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 IDSP22304 550 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 NAA30Q147X3 362 aaPredicted RBP15.84■□□□□ 0.13
USP48-210ENST00000489108 GPR19Q15760 415 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 ZNF569Q5MCW4 686 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 PLEKHS1Q5SXH7 462 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 AGAP9Q5VTM2 703 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 SP5Q6BEB4 398 aaPredicted RBP15.84■□□□□ 0.13
USP48-210ENST00000489108 ALG1LQ6GMV1 187 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 D2HGDHQ8N465 521 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 TTC30BQ8N4P2 665 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 GPR26Q8NDV2 337 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 NLNQ9BYT8 704 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 UNKQ9C0B0 810 aaKnown RBP15.84■□□□□ 0.13
USP48-210ENST00000489108 C5AR2Q9P296 337 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 B3GNT3Q9Y2A9 372 aa15.84■□□□□ 0.13
USP48-210ENST00000489108 COPG1Q9Y678 874 aaKnown RBP15.84■□□□□ 0.13
USP48-210ENST00000489108 UBA6A0AVT1 1052 aaPredicted RBP15.83■□□□□ 0.12
USP48-210ENST00000489108 ANKRD66B4E2M5 251 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 MEN1O00255 615 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 CA4P22748 312 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 FECHP22830 423 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 SERPINB6P35237 376 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 TUBB4BP68371 445 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 HSD11B2P80365 405 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 TUBB2AQ13885 445 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 BOLA3Q53S33 107 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 CRB2Q5IJ48 1285 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 KMT5CQ86Y97 462 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 LRRC49Q8IUZ0 686 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 DSELQ8IZU8 1212 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 MAML1Q92585 1016 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 GLYATL1Q969I3 302 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 ZNF653Q96CK0 615 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 ZNF501Q96CX3 271 aaPredicted RBP15.83■□□□□ 0.12
USP48-210ENST00000489108 TUBB2BQ9BVA1 445 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.83■□□□□ 0.12
USP48-210ENST00000489108 ENTPD4Q9Y227 616 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 NTNG1Q9Y2I2 539 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 F8P00451 2351 aa15.83■□□□□ 0.12
USP48-210ENST00000489108 MATN3O15232 486 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 CDK14O94921 469 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 CAPN1P07384 714 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 TPM2P07951 284 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 RARAP10276 462 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 PCK1P35558 622 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 GLRBP48167 497 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 ZNF165P49910 485 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 RRADP55042 308 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 GSDMDP57764 484 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 ATP1A4Q13733 1029 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 KYNUQ16719 465 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 KHDC1Q4VXA5 237 aaKnown RBP15.82■□□□□ 0.12
USP48-210ENST00000489108 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
USP48-210ENST00000489108 VWA5B1Q5TIE3 1220 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 TXNRD3NBQ6F5E7 133 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 IRF2BP2Q7Z5L9 587 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 GPR150Q8NGU9 434 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms