RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CA12O43570 354 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SYNCRIPO60506 623 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MATN4O95460 622 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CD160O95971 181 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CAPN1P07384 714 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 G6PDP11413 515 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CDH2P19022 906 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PLD1Q13393 1074 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PTGR1Q14914 329 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 B3GNT6Q6ZMB0 384 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 Q6ZSR9 355 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 RMND5BQ96G75 393 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ZFRQ96KR1 1074 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 RNF145Q96MT1 663 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ZNF599Q96NL3 588 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 KCTD14Q9BQ13 255 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 OSBPL11Q9BXB4 747 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MAGEH1Q9H213 219 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CCM2LQ9NUG4 571 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ARMC1Q9NVT9 282 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PCDHA9Q9Y5H5 950 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CCDC154A6NI56 674 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 H3BNH8 94 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 H6PDO95479 791 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PRR35P0CG20 571 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 HSPA7P48741 367 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 HMGCS1Q01581 520 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 AFTPHQ6ULP2 937 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MILR1Q7Z6M3 343 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SFRP1Q8N474 314 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MYLIPQ8WY64 445 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.45e-6■■□□□ 13.3
CLIC4-202ENST00000488683 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 NANOGQ9H9S0 305 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ZFP14Q9HCL3 533 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 RIMKLBQ9ULI2 386 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 POLR3HQ9Y535 204 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 E2F3O00716 465 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SNX2O60749 519 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 AOC2O75106 756 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 F11P03951 625 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ALDH2P05091 517 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 BMP2P12643 396 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 HRH2P25021 359 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ATP5C1P36542 298 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 KCNK10P57789 538 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ATP6V0D1P61421 351 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ZXDBP98169 803 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ABRAXAS2Q15018 415 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 TAF1AQ15573 450 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 RFTN2Q52LD8 501 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 PROKR1Q8TCW9 393 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 TCF12Q99081 682 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 CARS2Q9HA77 564 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 TMEM161AQ9NX61 479 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 NDUFA13Q9P0J0 144 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 FAM8A1Q9UBU6 413 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 ZNHIT2Q9UHR6 403 aa12.53□□□□□ -0.4
CLIC4-202ENST00000488683 TRMT6Q9UJA5 497 aaKnown RBP12.53□□□□□ -0.4
CLIC4-202ENST00000488683 SCN5AQ14524 2016 aa12.52□□□□□ -0.4
CLIC4-202ENST00000488683 ANKRD66B4E2M5 251 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 H0Y626 953 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 H0YJX3 145 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 KDELR3O43731 214 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 SLC22A3O75751 556 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TMCC1O94876 653 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TRIM16O95361 564 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 STAMBPO95630 424 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 HSPA8P11142 646 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 HSD17B1P14061 328 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 PKMP14618 531 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TCF3P15923 654 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 CCL23P55773 120 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TGFBIQ15582 683 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 C6orf136Q5SQH8 315 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TTC33Q6PID6 262 aaPredicted RBP12.52□□□□□ -0.41
CLIC4-202ENST00000488683 TFAP2CQ92754 450 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 ZUFSPQ96AP4 578 aa12.52□□□□□ -0.41
CLIC4-202ENST00000488683 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms