RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	PIPSL	A2A3N6	862 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	OR52A4P	A6NMU1	304 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	MTX2	O75431	263 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	MTA2	O94776	668 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	CYP1A2	P05177	515 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	PIRT	P0C851	137 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	NELFE	P18615	380 aa	Known RBP	11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	GNLY	P22749	145 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	RPL10	P27635	214 aa	Known RBP	11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	DRG2	P55039	364 aa	Known RBP	11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	PPP1CA	P62136	330 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	ZBTB17	Q13105	803 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	SEMA5A	Q13591	1074 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	LAMB3	Q13751	1172 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	GPR18	Q14330	331 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	CACHD1	Q5VU97	1274 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	FAM92B	Q6ZTR7	304 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	C11orf96	Q7Z7L8	435 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	TRIM48	Q8IWZ4	208 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	TRAM1L1	Q8N609	369 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	GLYATL1	Q969I3	302 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	HDAC11	Q96DB2	347 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	ZNF670	Q9BS34	389 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	TIMM29	Q9BSF4	260 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	ZSCAN5A	Q9BUG6	496 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	RAB33B	Q9H082	229 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	ACTL8	Q9H568	366 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	SEMA5B	Q9P283	1151 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	TMPRSS11E	Q9UL52	423 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	PADI1	Q9ULC6	663 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	SHOC2	Q9UQ13	582 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	SHANK1	Q9Y566	2161 aa		11.15	□□□□□ -0.62
SNU13-208	ENST00000488571	IGHV5-51	A0A0C4DH38	117 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571		A0A1B0GTH6	734 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	PDZK1P1	A8MUH7	402 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	C21orf140	B9A014	251 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	KCNK1	O00180	336 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	KMO	O15229	486 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	JCHAIN	P01591	159 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	CCNYL3	P0C7X3	344 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	RNF224	P0DH78	156 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	GJC1	P36383	396 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	TAS2R40	P59535	323 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	HADH	Q16836	314 aa	Known RBP	11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	AGAP9	Q5VTM2	703 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	CPZ	Q66K79	652 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	PDPK2P	Q6A1A2	396 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	PWWP2B	Q6NUJ5	590 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	IRGC	Q6NXR0	463 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	WASH2P	Q6VEQ5	465 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	TMC3	Q7Z5M5	1100 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	LRRTM4	Q86VH4	590 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	PPP1R3B	Q86XI6	285 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	PARP9	Q8IXQ6	854 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	KCTD6	Q8NC69	237 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	GALNT11	Q8NCW6	608 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	CPT1C	Q8TCG5	803 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	ZDHHC12	Q96GR4	267 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC41A2	Q96JW4	573 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	ADGRE3	Q9BY15	652 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	MAGEE1	Q9HCI5	957 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	MLXIPL	Q9NP71	852 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	WASH6P	Q9NQA3	447 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	HAUS2	Q9NVX0	235 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	WDR37	Q9Y2I8	494 aa		11.14	□□□□□ -0.63
SNU13-208	ENST00000488571	NOTCH2	Q04721	2471 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	MED13	Q9UHV7	2174 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571		A0A087X0T9	212 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	FAM187A	A6NFU0	413 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	TTLL8	A6PVC2	850 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	MYO1F	O00160	1098 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	VEGFD	O43915	354 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	VPS4B	O75351	444 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	SORBS2	O94875	1100 aa	Known RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	AGFG2	O95081	481 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	MT-ND3	P03897	115 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	FAM228B	P0C875	321 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	FOLR1	P15328	257 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	BPI	P17213	487 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	CASP14	P31944	242 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	SSR1	P43307	286 aa	Known RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	RPS18	P62269	152 aa	Known RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	IFI35	P80217	286 aa	Predicted RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	TYRO3	Q06418	890 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	PPID	Q08752	370 aa	Known RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	TUBB3	Q13509	450 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	IL10RA	Q13651	578 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	KCNAB1	Q14722	419 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	PDK2	Q15119	407 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	UGT8	Q16880	541 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	NADK2	Q4G0N4	442 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	CERS6	Q6ZMG9	384 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	RBM12B	Q8IXT5	1001 aa	Known RBP	11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	CCNY	Q8ND76	341 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	GPR150	Q8NGU9	434 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	TADA1	Q96BN2	335 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	IMP4	Q96G21	291 aa	Known RBP	11.13	□□□□□ -0.63

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