RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
TTC3-221ENST00000488522 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 BLACEA4D250 179 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 ANKRD66B4E2M5 251 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 C21orf140B9A014 251 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 UBXN7O94888 489 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MT-ND3P03897 115 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MMP2P08253 660 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 CD48P09326 243 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 NR1D1P20393 614 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 SLC19A1P41440 591 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 SLC1A1P43005 524 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MAPK9P45984 424 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 CAPZBP47756 277 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 DPYSL3Q14195 570 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 HADHQ16836 314 aaKnown RBP12.07□□□□□ -0.48
TTC3-221ENST00000488522 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 AGAP9Q5VTM2 703 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 C11orf63Q6NUN7 778 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 CYB5D1Q6P9G0 228 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 ZNF662Q6ZS27 426 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 ASB18Q6ZVZ8 466 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 DAAM2Q86T65 1068 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
TTC3-221ENST00000488522 TRAM1L1Q8N609 369 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 TEX19Q8NA77 164 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 GALNT6Q8NCL4 622 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 GALNT11Q8NCW6 608 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 LPCAT1Q8NF37 534 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 SEC14L1Q92503 715 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 EID2BQ96D98 161 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 HDAC11Q96DB2 347 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 OR6C1Q96RD1 312 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 ZSCAN5AQ9BUG6 496 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
TTC3-221ENST00000488522 TRIM39Q9HCM9 518 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.48
TTC3-221ENST00000488522 GUCA1BQ9UMX6 200 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 SLC30A1Q9Y6M5 507 aa12.07□□□□□ -0.48
TTC3-221ENST00000488522 SPOPO43791 374 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 SNX2O60749 519 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 CREG1O75629 220 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 BRAFP15056 766 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 COMTP21964 271 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 LEPRP48357 1165 aaKnown RBP12.06□□□□□ -0.48
TTC3-221ENST00000488522 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
TTC3-221ENST00000488522 SH3BP2P78314 561 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 FOXM1Q08050 763 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 ITKQ08881 620 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 SEMA5AQ13591 1074 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 DNASE1L3Q13609 305 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 KRT81Q14533 505 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 PAPD7Q5XG87 772 aaKnown RBP12.06□□□□□ -0.48
TTC3-221ENST00000488522 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
TTC3-221ENST00000488522 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 STAMBPL1Q96FJ0 436 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 SLC41A2Q96JW4 573 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 TRIB3Q96RU7 358 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 RAD18Q9NS91 495 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 KLC4Q9NSK0 619 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 SLC23A2Q9UGH3 650 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 PYCARDQ9ULZ3 195 aa12.06□□□□□ -0.48
TTC3-221ENST00000488522 PCDHGA9Q9Y5G4 932 aaKnown RBP12.06□□□□□ -0.48
TTC3-221ENST00000488522 GRID2IPA4D2P6 1211 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 KMOO15229 486 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 VEGFDO43915 354 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 SPAG6O75602 509 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 VIPP01282 170 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 PDGFAP04085 211 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 KRT7P08729 469 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 ZNF7P17097 686 aaPredicted RBP12.05□□□□□ -0.48
TTC3-221ENST00000488522 TYRP1P17643 537 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 NELFEP18615 380 aaKnown RBP12.05□□□□□ -0.48
TTC3-221ENST00000488522 MX2P20592 715 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 GJC1P36383 396 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 MLLT10P55197 1068 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 TAS2R40P59535 323 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 IFI35P80217 286 aaPredicted RBP12.05□□□□□ -0.48
TTC3-221ENST00000488522 ERV3-1Q14264 604 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 PDK2Q15119 407 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 SLC14A2Q15849 920 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 C11orf96Q7Z7L8 435 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 LRRTM4Q86VH4 590 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
TTC3-221ENST00000488522 PPP1R3BQ86XI6 285 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 CPNE8Q86YQ8 564 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 ZNF547Q8IVP9 402 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 CNTD1Q8N815 330 aa12.05□□□□□ -0.48
TTC3-221ENST00000488522 GPR26Q8NDV2 337 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms