RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 PDE1BQ01064 536 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 NUCB1Q02818 461 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ZBTB17Q13105 803 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 SNTA1Q13424 505 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 GRAPQ13588 217 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 TNFAIP1Q13829 316 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 MVPQ14764 893 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 NTRK2Q16620 822 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 IGSF11Q5DX21 431 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 CFAP58Q5T655 872 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 KRBA2Q6ZNG9 492 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 Q75L30 129 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 GPR180Q86V85 440 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ARID3BQ8IVW6 561 aaPredicted RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 PM20D2Q8IYS1 436 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 LMO3Q8TAP4 145 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 SPATA20Q8TB22 786 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ZFAND2BQ8WV99 257 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 PIGTQ969N2 578 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 JAKMIP2Q96AA8 810 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ERP27Q96DN0 273 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 GCNAQ96QF7 691 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 NUDCD1Q96RS6 583 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 SEMA3CQ99985 751 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 SLF1Q9BQI6 1058 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 C1QTNF1Q9BXJ1 281 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 TM6SF1Q9BZW5 370 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 RAD21L1Q9H4I0 556 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ARHGEF38Q9NXL2 777 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 TAS2R14Q9NYV8 317 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 MRPL15Q9P015 296 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 UBA2Q9UBT2 640 aaPredicted RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 DNAJB4Q9UDY4 337 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 RALYQ9UKM9 306 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 AMDHD2Q9Y303 409 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM184BQ9Y519 407 aaPredicted RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 PCDHGA5Q9Y5G8 931 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 LRRC72A6NJI9 287 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 GLOD5A6NK44 160 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF432O94892 652 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PLGP00747 810 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 DNTTP04053 509 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 CENPBP07199 599 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 KCNA5P22460 613 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 KRT20P35900 424 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PEX5P50542 639 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 FUT6P51993 359 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 STAT2P52630 851 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PPP5CP53041 499 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 EEF1A2Q05639 463 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TRAF2Q12933 501 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 MEP1AQ16819 746 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 FAM98BQ52LJ0 330 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 GARNL3Q5VVW2 1013 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 NADSYN1Q6IA69 706 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TEX38Q6PEX7 206 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 ASB18Q6ZVZ8 466 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF534Q76KX8 674 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 ADIPOR2Q86V24 386 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 MAP7D3Q8IWC1 876 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 EMC1Q8N766 993 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 KBTBD3Q8NAB2 608 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 OR52I2Q8NH67 350 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TBC1D16Q8TBP0 767 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 UTP15Q8TED0 518 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PTPMT1Q8WUK0 201 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PRPF31Q8WWY3 499 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 SORCS1Q8WY21 1168 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 FIG4Q92562 907 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TMCO6Q96DC7 493 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 RTP4Q96DX8 246 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 QRFPRQ96P65 431 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 CDRT15Q96T59 188 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 KIFC3Q9BVG8 833 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TEX12Q9BXU0 123 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 SEMA6AQ9H2E6 1030 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 GIMAP4Q9NUV9 329 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 TRMT1Q9NXH9 659 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 DBNLQ9UJU6 430 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 RPS6KL1Q9Y6S9 549 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 FAM169AQ9Y6X4 670 aa2.78□□□□□ -1.96
R3HDM1-219ENST00000488035 PRAG1Q86YV5 1406 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 CGNL1Q0VF96 1302 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 PASKQ96RG2 1323 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 A0A087WYN8 130 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 OR2M5A3KFT3 312 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 SYNDIG1LA6NDD5 238 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 OR5K3A6NET4 321 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 LILRA5A6NI73 299 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 TULP2O00295 520 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 TIMM44O43615 452 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 AVILO75366 819 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 GCNT3O95395 438 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 GH2P01242 217 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 CDH1P12830 882 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 SAT1P21673 171 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 TROAPQ12815 778 aa2.77□□□□□ -1.97
R3HDM1-219ENST00000488035 ILF3Q12906 894 aaKnown RBP eCLIP2.77□□□□□ -1.973e-8■■■■■ 28.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms