RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TECPR1Q7Z6L1 1165 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 RAB43Q86YS6 212 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 ZDHHC17Q8IUH5 632 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 AVL9Q8NBF6 648 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 CHDHQ8NE62 594 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 TMEM121Q9BTD3 319 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 MLPHQ9BV36 600 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 RAB33BQ9H082 229 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 GOLGA6AQ9NYA3 693 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 SCHIP1Q9P0W5 487 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 ZNF624Q9P2J8 865 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 TNFRSF10DQ9UBN6 386 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 UBA2Q9UBT2 640 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 ARMCX3Q9UH62 379 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 PCDHA7Q9UN72 937 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 PCM1Q15154 2024 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 CCDC78A2IDD5 438 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 WASH4PA8MWX3 477 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 GNB5O14775 395 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 CREB3O43889 395 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 KLHL41O60662 606 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 KLF7O75840 302 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 KLK3P07288 261 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 ACP5P13686 325 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 XRCC1P18887 633 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 VIPR1P32241 457 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ADRA1BP35368 520 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 SCNN1AP37088 669 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 GPR1P46091 355 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 GSDMDP57764 484 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 YBEYP58557 167 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 POLR2LP62875 67 aaKnown RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 PPP2R2AP63151 447 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 CSNK1G2P78368 415 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ACY1Q03154 408 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 BCL2L1Q07817 233 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 CUL4AQ13619 759 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 NCF4Q15080 339 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 PTPRRQ15256 657 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 DENND2CQ68D51 928 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 IRGCQ6NXR0 463 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 FAM180AQ6UWF9 173 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 NLRP8Q86W28 1048 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ZNF354CQ86Y25 554 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 TMEM126BQ8IUX1 230 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 SMYD4Q8IYR2 804 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 D2HGDHQ8N465 521 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 LZTR1Q8N653 840 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 BCORP1Q8N888 145 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 RTL3Q8N8U3 475 aaKnown RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 CLEC1AQ8NC01 280 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 SHC3Q92529 594 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 UBXN4Q92575 508 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 NRGNQ92686 78 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ZNF501Q96CX3 271 aaPredicted RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 TBC1D31Q96DN5 1066 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ARSGQ96EG1 525 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 ZDHHC12Q96GR4 267 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 FER1L6-AS2Q96M78 137 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 CFAP57Q96MR6 1250 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 AGAP2Q99490 1192 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
XRN1-212ENST00000486211 ABCA4P78363 2273 aa8.08□□□□□ -1.12
XRN1-212ENST00000486211 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 NPIPB15A6NHN6 443 aaPredicted RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 J3KR12 359 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PSMD11O00231 422 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 FANCGO15287 622 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 P4HA2O15460 535 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 CLDN14O95500 239 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 ARAFP10398 606 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 EPXP11678 715 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 OTX2P32243 289 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 CLCNKAP51800 687 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 TUBB4BP68371 445 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 ABRQ12979 859 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PAK1Q13153 545 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 TUBB2AQ13885 445 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 GPR19Q15760 415 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 PARP15Q460N3 678 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
XRN1-212ENST00000486211 TSPAN33Q86UF1 283 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 DNAJB14Q8TBM8 379 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 NR4A3Q92570 626 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 SCAMP4Q969E2 229 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 SNX21Q969T3 373 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 IP6K3Q96PC2 410 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 TAAR6Q96RI8 345 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 SMR3AQ99954 134 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 TUBB2BQ9BVA1 445 aa8.07□□□□□ -1.12
XRN1-212ENST00000486211 ZCCHC2Q9C0B9 1178 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms