RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 PGAM1P18669 254 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 GRK6P43250 576 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 LIMK1P53667 647 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 ARHGAP8P85298 464 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ILF3Q12906 894 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-227ENST00000485479 CTBP1Q13363 440 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 GTF2H3Q13889 308 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 NFE2L1Q14494 772 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 ZNF470Q6ECI4 717 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 FAM83HQ6ZRV2 1179 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 LRRTM4Q86VH4 590 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ZNF761Q86XN6 746 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 KYQ8NBH2 561 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 LKAAEAR1Q8TD35 194 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 DCUN1D1Q96GG9 259 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 APOLD1Q96LR9 279 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 MRM3Q9HC36 420 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ZDHHC18Q9NUE0 388 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CRYL1Q9Y2S2 319 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 TEX264Q9Y6I9 313 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 FREM2Q5SZK8 3169 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 LY6G6EA0A0G2JKS1 128 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 PRAMEF33A0A0G2JMD5 474 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 USP1O94782 785 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 PSMA3P25788 255 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ECHS1P30084 290 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 SSTR1P30872 391 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 MAZP56270 477 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 MPP1Q00013 466 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-227ENST00000485479 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 KIAA0930Q6ICG6 404 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-227ENST00000485479 OR4C6Q8NH72 309 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CNDP2Q96KP4 475 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 FBXO6Q9NRD1 293 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 ZDHHC3Q9NYG2 299 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 GPR34Q9UPC5 381 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CFAP20Q9Y6A4 193 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 U3KQA8 63 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ASXL3Q9C0F0 2248 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 NEMP2A6NFY4 417 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 YKT6O15498 198 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 VEGFDO43915 354 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 POP7O75817 140 aaKnown RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 POLBP06746 335 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 ATP1B2P14415 290 aaPredicted RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 PMLP29590 882 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 SLC1A2P43004 574 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 PGGT1BP53609 377 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 LAMB3Q13751 1172 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 GPR33Q49SQ1 333 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 ULK4Q96C45 1275 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 TRNAU1APQ9NX07 287 aaKnown RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 NLGN3Q9NZ94 848 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
APTX-227ENST00000485479 FTSJ1Q9UET6 329 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 RIMKLBQ9ULI2 386 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 WDR37Q9Y2I8 494 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 RP1P56715 2156 aa11.69□□□□□ -0.54
APTX-227ENST00000485479 CPED1A4D0V7 1026 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 OR52A4PA6NMU1 304 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 PREPP48147 710 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 SIM1P81133 766 aaPredicted RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 CENPUQ71F23 418 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 GKN2Q86XP6 184 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms