RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 INTUQ9ULD6 942 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 HEMK1Q9Y5R4 338 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 FLNCQ14315 2725 aa17.71■□□□□ 0.42
ATG4B-221ENST00000483778 GPR89AB7ZAQ6 455 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 POLR1CO15160 346 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 CAPN5O15484 640 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 DLGAP3O95886 979 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 GPR89BP0CG08 455 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 AMD1P17707 334 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 MAP4P27816 1152 aaKnown RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 OAS2P29728 719 aaKnown RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 HMGCLP35914 325 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 MAGEA1P43355 309 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 CTSCP53634 463 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 TFDP2Q14188 446 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 GPR18Q14330 331 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 ODF2Q5BJF6 829 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 FAM151BQ6UXP7 276 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 MICALCLQ6ZW33 695 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 PID1Q7Z2X4 250 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 TC2NQ8N9U0 490 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 KRT35Q92764 455 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 ELMO2Q96JJ3 720 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 TEFMQ96QE5 360 aaKnown RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 VPS35Q96QK1 796 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 HEMGNQ9BXL5 484 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 SLC25A18Q9H1K4 315 aa17.7■□□□□ 0.42
ATG4B-221ENST00000483778 GPN2Q9H9Y4 310 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-221ENST00000483778 PIKFYVEQ9Y2I7 2098 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 hCG_1818297A0A087WSY0 165 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 AKR1B15C9JRZ8 316 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-221ENST00000483778 AGTP01019 485 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 ANKRD34CP0C6C1 535 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 POLE2P56282 527 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 FOXM1Q08050 763 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 OLIG2Q13516 323 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 SLC1A5Q15758 541 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 AGAP9Q5VTM2 703 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 WASH2PQ6VEQ5 465 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 TRAPPC5Q8IUR0 188 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 TRIM48Q8IWZ4 208 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 IPMKQ8NFU5 416 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 GPR150Q8NGU9 434 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 GDAP1Q8TB36 358 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 FCRL5Q96RD9 977 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 EPB41L1Q9H4G0 881 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 WASH6PQ9NQA3 447 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 PSMD13Q9UNM6 376 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 KCTD3Q9Y597 815 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 COL12A1Q99715 3063 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 MED13Q9UHV7 2174 aa17.69■□□□□ 0.42
ATG4B-221ENST00000483778 TNRC6AQ8NDV7 1962 aaKnown RBP17.68■□□□□ 0.42
ATG4B-221ENST00000483778 ZNF891A8MT65 544 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-221ENST00000483778 POP7O75817 140 aaKnown RBP17.68■□□□□ 0.42
ATG4B-221ENST00000483778 TPM1P09493 284 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 IDSP22304 550 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 HADHBP55084 474 aaKnown RBP17.68■□□□□ 0.42
ATG4B-221ENST00000483778 ABHD18Q0P651 414 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 KCNAB2Q13303 367 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 TFDP3Q5H9I0 405 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 COLEC12Q5KU26 742 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 FAM92BQ6ZTR7 304 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 BLOC1S5Q8TDH9 187 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 P3H4Q92791 437 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 OR6C1Q96RD1 312 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
ATG4B-221ENST00000483778 KLHL8Q9P2G9 620 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-221ENST00000483778 DOPEY2Q9Y3R5 2298 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 RCCD1A6NED2 376 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 PPFIA2O75334 1257 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 ZRANB2O95218 330 aaKnown RBP eCLIP17.67■□□□□ 0.42
ATG4B-221ENST00000483778 EPOP01588 193 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 FURINP09958 794 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 SFTPCP11686 197 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 STAT5AP42229 794 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 CDC20Q12834 499 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 NFE2L1Q14494 772 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 SKIDA1Q1XH10 827 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 DEFB109BQ30KR1 87 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 CACHD1Q5VU97 1274 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 TMEM220Q6QAJ8 160 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 CERS6Q6ZMG9 384 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 ATG14Q6ZNE5 492 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 KATNAL2Q8IYT4 538 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 RCOR2Q8IZ40 523 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 BEND7Q8N7W2 519 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-221ENST00000483778 GALNT6Q8NCL4 622 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 KLHL6Q8WZ60 621 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 CXorf40BQ96DE9 158 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 QKIQ96PU8 341 aaKnown RBP eCLIP17.67■□□□□ 0.42
ATG4B-221ENST00000483778 PCDHA13Q9Y5I0 950 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 RPS6KL1Q9Y6S9 549 aa17.67■□□□□ 0.42
ATG4B-221ENST00000483778 IGHV5-51A0A0C4DH38 117 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 OR2AG2A6NM03 316 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 RASSF9O75901 435 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 TIAF1O95411 115 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 LCA5LO95447 670 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 RBL1P28749 1068 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms