RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 SPATA31C1P0DKV0 1188 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 POU2F1P14859 743 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RPL9P32969 192 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDKN2BP42772 138 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RORCP51449 518 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MBTD1Q05BQ5 628 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MERTKQ12866 999 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DEFB115Q30KQ5 88 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SLC9B1Q4ZJI4 515 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 FBXL19Q6PCT2 694 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 LAPTM4BQ86VI4 370 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 KLHL5Q96PQ7 755 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TBC1D17Q9HA65 648 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 EBF2Q9HAK2 575 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PREBQ9HCU5 417 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PLCL2Q9UPR0 1127 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TNFSF13BQ9Y275 285 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MAN2B2Q9Y2E5 1009 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PRMT5O14744 637 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDC40O60508 579 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TBX10O75333 385 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ATP5C1P36542 298 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 JAM2P57087 298 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RAB15P59190 212 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 VBP1P61758 197 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SNRPD1P62314 119 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TOMM20Q15388 145 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TCEA2Q15560 299 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ZACNQ401N2 412 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RAET1GQ6H3X3 334 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RHBDF2Q6PJF5 856 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 USP30Q70CQ3 517 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 OR10A6Q8NH74 314 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MCMBPQ9BTE3 642 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SEC14L3Q9UDX4 400 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TESMINQ9Y4I5 508 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 FGF1P05230 155 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 HOXC6P09630 235 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 LIMK2P53671 638 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DCDC1P59894 354 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CD83Q01151 205 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SMU1Q2TAY7 513 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 IDNKQ5T6J7 187 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 HJURPQ8NCD3 748 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DQX1Q8TE96 717 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PPP1R13LQ8WUF5 828 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TSEN15Q8WW01 171 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SLC22A4Q9H015 551 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ATP13A3Q9H7F0 1226 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PLK2Q9NYY3 685 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ZNF780BQ9Y6R6 833 aa9.47□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PLIN3O60664 434 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RPP40O75818 363 aaKnown RBP9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SCELO95171 688 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ZNF806P0C7X5 589 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ALDH3A2P51648 485 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDH12P55289 794 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ZNF460Q14592 562 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DCST1Q5T197 706 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 TMEM110Q86TL2 294 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 SLC22A16Q86VW1 577 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 KIAA0319LQ8IZA0 1049 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 LIX1Q8N485 282 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ZNF615Q8N8J6 731 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CSPG4P5Q96PW8 444 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PCDHAC1Q9H158 963 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 GLOD4Q9HC38 313 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 FBXO10Q9UK96 956 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 HES2Q9Y543 173 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CXCR6O00574 342 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PIP5K1BO14986 540 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DNAJA2O60884 412 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CCNB2O95067 398 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 KIR3DL1P43629 444 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PSEN1P49768 467 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 ACTR3P61158 418 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CLCQ05315 142 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PCDH1Q08174 1060 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CAPSQ13938 189 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 FOXR2Q6PJQ5 311 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 VSTM1Q6UX27 236 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 RBFAQ8N0V3 343 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 GAD1Q99259 594 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDT1Q9H211 546 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 PPM1HQ9ULR3 514 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 EI24O14681 340 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CHRM5P08912 532 aaPredicted RBP9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CD36P16671 472 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 GPR1P46091 355 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 CDH15P55291 814 aa9.46□□□□□ -0.89
CDK5RAP2-216ENST00000483412 MYBPC3Q14896 1274 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms