RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 ASIC3Q9UHC3 531 aa16.08■□□□□ 0.16
CCDC78-212ENST00000482152 ANAPC5Q9UJX4 755 aa16.08■□□□□ 0.16
CCDC78-212ENST00000482152 KLK13Q9UKR3 277 aa16.08■□□□□ 0.16
CCDC78-212ENST00000482152 RNF215Q9Y6U7 377 aa16.08■□□□□ 0.16
CCDC78-212ENST00000482152 TCRBV7S3A2A0A539 114 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 CCDC162PA2VCL2 907 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 A6NCN8 305 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 MGAT4DA6NG13 374 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 NTN3O00634 580 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-212ENST00000482152 GPR39O43194 453 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-212ENST00000482152 CA5AP35218 305 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 NSG1P42857 185 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 PTGIRP43119 386 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 ARSDP51689 593 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 SQSTM1Q13501 440 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 FNBP1LQ5T0N5 605 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 PACS1Q6VY07 963 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 RBM44Q6ZP01 1051 aaKnown RBP16.07■□□□□ 0.16
CCDC78-212ENST00000482152 ZNF534Q76KX8 674 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 CAND1Q86VP6 1230 aaKnown RBP16.07■□□□□ 0.16
CCDC78-212ENST00000482152 CCNJLQ8IV13 435 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 RBM12BQ8IXT5 1001 aaKnown RBP16.07■□□□□ 0.16
CCDC78-212ENST00000482152 NAT8LQ8N9F0 302 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 OR6P1Q8NGX9 317 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 OR2L2Q8NH16 312 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 SGF29Q96ES7 293 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 DPYSL5Q9BPU6 564 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 LRRN3Q9H3W5 708 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 OSGEPL1Q9H4B0 414 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 UCK1Q9HA47 277 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 SAMD15Q9P1V8 674 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 ACSL5Q9ULC5 683 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 SOX13Q9UN79 622 aa16.07■□□□□ 0.16
CCDC78-212ENST00000482152 OR2AG2A6NM03 316 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 KIF2AO00139 706 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 CCL22O00626 93 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 FANCGO15287 622 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 SNX2O60749 519 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 GOT2P00505 430 aaKnown RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 PAMP19021 973 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 SPINK2P20155 84 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 MGAT1P26572 445 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 FOXN2P32314 431 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 HALP42357 657 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 PRLHRP49683 370 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 CTSCP53634 463 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 MAZP56270 477 aaKnown RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 GPLD1P80108 840 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 B4GALNT1Q00973 533 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 SPIDRQ14159 915 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 METRNLQ641Q3 311 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 ZNF449Q6P9G9 518 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 MAATS1Q7Z4T9 603 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 KLHL7Q8IXQ5 586 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 MPP5Q8N3R9 675 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 SLC37A2Q8TED4 501 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 ZNF778Q96MU6 729 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 GFM1Q96RP9 751 aaKnown RBP16.06■□□□□ 0.16
CCDC78-212ENST00000482152 CCM2Q9BSQ5 444 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 NRSN2Q9GZP1 204 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 EPB41L1Q9H4G0 881 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 FAM96AQ9H5X1 160 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 TREX1Q9NSU2 369 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
CCDC78-212ENST00000482152 ZNF106Q9H2Y7 1883 aaKnown RBP16.05■□□□□ 0.16
CCDC78-212ENST00000482152 TMEM8BA6NDV4 472 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 DNALI1O14645 258 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-212ENST00000482152 PFDN6O15212 129 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 TTPAP49638 278 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 CDKN1CP49918 316 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-212ENST00000482152 CCL7P80098 99 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 HHEXQ03014 270 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 TUBB2AQ13885 445 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 DBN1Q16643 649 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 ANKRD22Q5VYY1 191 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 SPRED1Q7Z699 444 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 PIANPQ8IYJ0 282 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 TMEM74Q96NL1 305 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 SERPINB12Q96P63 405 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 SLC38A3Q99624 504 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 TUBB2BQ9BVA1 445 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 PRDM8Q9NQV8 689 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 POT1Q9NUX5 634 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 CPNE7Q9UBL6 633 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 DNAJC16Q9Y2G8 782 aa16.05■□□□□ 0.16
CCDC78-212ENST00000482152 FAM237BA0A1B0GVD1 139 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 CCDC78A2IDD5 438 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 PDZK1P1A8MUH7 402 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 PPM1DO15297 605 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 SGTAO43765 313 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 TMEM63AO94886 807 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 EML2O95834 649 aa16.04■□□□□ 0.16
CCDC78-212ENST00000482152 RPLP0P05388 317 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms