RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 GSTA1P08263 222 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 COL6A2P12110 1019 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 AKT2P31751 481 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 CLCN7P51798 805 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 SLC18A1P54219 525 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 CLDN2P57739 230 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 GTF2H3Q13889 308 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 INSCQ1MX18 579 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 USP39Q53GS9 565 aaKnown RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM220Q6QAJ8 160 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 CCDC91Q7Z6B0 441 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 CLEC14AQ86T13 490 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 TBC1D1Q86TI0 1168 aaPredicted RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 KCTD4Q8WVF5 259 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 ANKRD49Q8WVL7 239 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 INPP5DQ92835 1189 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 FUBP1Q96AE4 644 aaKnown RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 NXNL1Q96CM4 212 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 APOOQ9BUR5 198 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 C1QTNF1Q9BXJ1 281 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 IQCGQ9H095 443 aaKnown RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 SYTL2Q9HCH5 934 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 LATS2Q9NRM7 1088 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 PHPT1Q9NRX4 125 aaPredicted RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 ZNF358Q9NW07 568 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 NKIRAS1Q9NYS0 192 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 ATXN10Q9UBB4 475 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 GRID1Q9ULK0 1009 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 RUVBL2Q9Y230 463 aaKnown RBP17.34■□□□□ 0.37
UPF3A-206ENST00000480362 DHRS7Q9Y394 339 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 QSOX1O00391 747 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 KLHL2O95198 593 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 ZWINTO95229 277 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CCDC166P0CW27 439 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CHN1P15882 459 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 ZNF8P17098 575 aaPredicted RBP17.33■□□□□ 0.36
UPF3A-206ENST00000480362 HOXA6P31267 233 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CTSCP53634 463 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 GYS2P54840 703 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 DLG1Q12959 904 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CSHL1Q14406 222 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 C16orf46Q6P387 395 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 DOK6Q6PKX4 331 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CENPLQ8N0S6 344 aaPredicted RBP17.33■□□□□ 0.36
UPF3A-206ENST00000480362 SPATA6LQ8N4H0 392 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 DEFB119Q8N690 84 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 BEND7Q8N7W2 519 aaPredicted RBP17.33■□□□□ 0.36
UPF3A-206ENST00000480362 GIMAP7Q8NHV1 300 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CD200R1Q8TD46 325 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 MGARPQ8TDB4 240 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 DENND1AQ8TEH3 1009 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 SPACA7Q96KW9 195 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 UBXN10Q96LJ8 280 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 TSNARE1Q96NA8 513 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 TSSK1BQ9BXA7 367 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 EPHX3Q9H6B9 360 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 SPATS2LQ9NUQ6 558 aaKnown RBP17.33■□□□□ 0.36
UPF3A-206ENST00000480362 TMEM216Q9P0N5 145 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 SLC17A7Q9P2U7 560 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 CA5BQ9Y2D0 317 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 PLLPQ9Y342 182 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 HS3ST3A1Q9Y663 406 aa17.33■□□□□ 0.36
UPF3A-206ENST00000480362 TECTAO75443 2155 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 POM121BA6NF01 834 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 METTL12A8MUP2 240 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 PRAMEF26H0Y7S4 382 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 TM9SF1O15321 606 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 MAGEC1O60732 1142 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 LTA4HP09960 611 aaKnown RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 MYCLP1P12525 358 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 ZNF37AP17032 561 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 CCR7P32248 378 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 SLC26A3P40879 764 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 SEPT7Q16181 437 aaKnown RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 N4BP2L1Q5TBK1 243 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 NAPRTQ6XQN6 538 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 SLC36A4Q6YBV0 504 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 LCA5Q86VQ0 697 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 TMEM105Q8N8V8 129 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 FOXJ1Q92949 421 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 BMFQ96LC9 184 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 FAM111AQ96PZ2 611 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 PCED1AQ9H1Q7 454 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 PRMT8Q9NR22 394 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 IGSF5Q9NSI5 407 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 DMTF1Q9Y222 760 aa17.32■□□□□ 0.36
UPF3A-206ENST00000480362 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-206ENST00000480362 CCDC163A0A0D9SF12 145 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 CACNB4O00305 520 aaPredicted RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 MAP3K13O43283 966 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 FTH1P02794 183 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 HOXC4P09017 264 aaPredicted RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 AOAHP28039 575 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 NUDT1P36639 197 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 FNTBP49356 437 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms