RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PRKAR1AP10644 381 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 SLC2A4P14672 509 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 ZNF28P17035 718 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 AMD1P17707 334 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 CD82P27701 267 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 PSMB4P28070 264 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 ATP1A2P50993 1020 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 ZNF75DP51815 510 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 TMPRSS15P98073 1019 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 FOXM1Q08050 763 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 GPR18Q14330 331 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 SPARCL1Q14515 664 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 SLC14A2Q15849 920 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 ATP1A1-AS1Q5TC04 95 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 WDR74Q6RFH5 385 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 CCDC112Q8NEF3 446 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 ACTL9Q8TC94 416 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 SH3KBP1Q96B97 665 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 DDA1Q9BW61 102 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 FSD1LQ9BXM9 530 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 SLC12A9Q9BXP2 914 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 PACSIN2Q9UNF0 486 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 PCDHGA3Q9Y5H0 932 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 PRR19A6NJB7 356 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 B4E171 279 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 B8ZZF3 427 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 SLC28A2O43868 658 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 HMGCLP35914 325 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 TSPAN7P41732 249 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 MC2RQ01718 297 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 GTF2H3Q13889 308 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 PDPK2PQ6A1A2 396 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 TMEM220Q6QAJ8 160 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 BBS12Q6ZW61 710 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 TAB3Q8N5C8 712 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 ZSCAN1Q8NBB4 408 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 CCDC110Q8TBZ0 833 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 CXorf40BQ96DE9 158 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 VPS35Q96QK1 796 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 DPYSL5Q9BPU6 564 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 TIMM29Q9BSF4 260 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 FAM96AQ9H5X1 160 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 RAD18Q9NS91 495 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 IL17BQ9UHF5 180 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 FKBPLQ9UIM3 349 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 PILRAQ9UKJ1 303 aa17.08■□□□□ 0.32
ECHDC1-216ENST00000479525 GLYATL1P3A0A0U1RQE8 302 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 LILRA5A6NI73 299 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 J3QKU1 62 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 CAPN5O15484 640 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 NKX2-8O15522 239 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 DDX3YO15523 660 aaKnown RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 VEGFDO43915 354 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 RASSF9O75901 435 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 NDUFA10O95299 355 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 CLCNKAP51800 687 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 EPHA4P54764 986 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 COLEC12Q5KU26 742 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 GPRC6AQ5T6X5 926 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 IRGCQ6NXR0 463 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 C9orf72Q96LT7 481 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 TTC25Q96NG3 672 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 GBA3Q9H227 469 aa17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 EPN1Q9Y6I3 576 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 MN1Q10571 1320 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-216ENST00000479525 PIKFYVEQ9Y2I7 2098 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 STX7O15400 261 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 KCNN4O15554 427 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 POP7O75817 140 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 STK17BO94768 372 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 APOC2P02655 101 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 IDSP22304 550 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 AKT1P31749 480 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 CTNNA1P35221 906 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 MPP3Q13368 585 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 FNBP1LQ5T0N5 605 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 CEACAM20Q6UY09 585 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 CERS6Q6ZMG9 384 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 OR4K2Q8NGD2 314 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 ALG3Q92685 438 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 OSBPL8Q9BZF1 889 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 PIH1D1Q9NWS0 290 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms