RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CCDC38Q502W7 563 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 LACTB2Q53H82 288 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 ANKRD20A8PQ5CZ79 823 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 CAPRIN2Q6IMN6 1127 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 CYB5D1Q6P9G0 228 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 EMBQ6PCB8 327 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DOK6Q6PKX4 331 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 C6orf89Q6UWU4 347 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RAD9BQ6WBX8 426 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 CCDC121Q6ZUS5 278 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 CYP4V2Q6ZWL3 525 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 BZW1Q7L1Q6 419 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 ZNF572Q7Z3I7 529 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 HEATR4Q86WZ0 1026 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RFX6Q8HWS3 928 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 NAGSQ8N159 534 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.59□□□□□ -1.35
VCP-205ENST00000479300 NOA1Q8NC60 698 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 OR4D9Q8NGE8 314 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ZNF473Q8WTR7 871 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 LRRN4Q8WUT4 740 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 AP2M1Q96CW1 435 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RTP4Q96DX8 246 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DTD2Q96FN9 168 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SCRN2Q96FV2 425 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 COQ10AQ96MF6 247 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 OSBPL9Q96SU4 736 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RUFY1Q96T51 708 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 CTRCQ99895 268 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DESI2Q9BSY9 194 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DDA1Q9BW61 102 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ADGRE3Q9BY15 652 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 STN1Q9H668 368 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 LRRC4CQ9HCJ2 640 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ETNK2Q9NVF9 386 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SLC39A1Q9NY26 324 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DDX56Q9NY93 547 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PDP2Q9P2J9 529 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PLEKHM1Q9Y4G2 1056 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MRPS18BQ9Y676 258 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 CACNA1DQ01668 2161 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SHANK1Q9Y566 2161 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RP1L1Q8IWN7 2480 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 HIVEP3Q5T1R4 2406 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 ZNF106Q9H2Y7 1883 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 LRRD1A4D1F6 860 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 EFCAB7A8K855 629 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 B4E171 279 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 APOL1O14791 398 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 SPOPO43791 374 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 MFSD11O43934 449 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 DNAJC8O75937 253 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 EML2O95834 649 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 KRT1P04264 644 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 CEACAM5P06731 702 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 FESP07332 822 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 SLC2A4P14672 509 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TCF4P15884 667 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 GNLYP22749 145 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 KDELR1P24390 212 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 COL8A1P27658 744 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TEAD1P28347 426 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 HNRNPH3P31942 346 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 ETV3P41162 512 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TSPAN7P41732 249 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 GNPDA1P46926 289 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 RPL26P61254 145 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 AP1B1Q10567 949 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 SQSTM1Q13501 440 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 RIPK1Q13546 671 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 NAA25Q14CX7 972 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 PDK1Q15118 436 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 PTPRRQ15256 657 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 PAPD7Q5XG87 772 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 NCBP2-AS2Q69YL0 99 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 ZNF787Q6DD87 383 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TXNRD3NBQ6F5E7 133 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 Q6ZVL8 140 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TMEM135Q86UB9 458 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 ZNF761Q86XN6 746 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 GALNT13Q8IUC8 556 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TP53INP2Q8IXH6 220 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 RHOT1Q8IXI2 618 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 NRSN1Q8IZ57 195 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 PGBD5Q8N414 524 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 MMGT1Q8N4V1 131 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TEX26Q8N6G2 289 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 DRAXINQ8NBI3 349 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 AGBL5Q8NDL9 886 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 LPCAT1Q8NF37 534 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 APOBEC4Q8WW27 367 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 FATE1Q969F0 183 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 CAVIN3Q969G5 261 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms