RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KLHL33A6NCF5 533 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 E5RI56 91 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 EI24O14681 340 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 SMAD6O43541 496 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 STAMBPO95630 424 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 SELPP16109 830 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 UGT1A1P22309 533 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 UGT1A4P22310 534 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 UGT1A3P35503 534 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 UGT1A5P35504 534 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 SP3Q02447 781 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 LIPEQ05469 1076 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 TGFBIQ15582 683 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 HACD2Q6Y1H2 254 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 ADGRG5Q8IZF4 528 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 BBS5Q8N3I7 341 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 SFRP1Q8N474 314 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 TTC30BQ8N4P2 665 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 FNDC5Q8NAU1 212 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 POPDC3Q9HBV1 291 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 CCM2LQ9NUG4 571 aaPredicted RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 CDC14AQ9UNH5 594 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 PRSS21Q9Y6M0 314 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 NUP214P35658 2090 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 PRRC2BQ5JSZ5 2229 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 SYNCRIPO60506 623 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 SNX2O60749 519 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 TBL1XO60907 577 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 VPS26AO75436 327 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 CLDN11O75508 207 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 ESRRBO95718 433 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 CAPN1P07384 714 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 PCNAP12004 261 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 IL2P60568 153 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 ZIK1Q3SY52 487 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 C6orf136Q5SQH8 315 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 TTC33Q6PID6 262 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 DEFB128Q7Z7B8 93 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 MINDY1Q8N5J2 469 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 MAGEE2Q8TD90 523 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 TFAP2CQ92754 450 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 PEX13Q92968 403 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 TOP1MTQ969P6 601 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 PPM1MQ96MI6 270 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 UHRF1Q96T88 793 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 TCF12Q99081 682 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 EFHD1Q9BUP0 239 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 LTB4R2Q9NPC1 389 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 AIG1Q9NVV5 245 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 RSL24D1Q9UHA3 163 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 CLEC4EQ9ULY5 219 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 MAGED1Q9Y5V3 778 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 A0A1W2PP18 115 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 H0Y626 953 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 FFAR3O14843 346 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 GPR42O15529 346 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 B4GAT1O43505 415 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 SLC22A3O75751 556 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 IDO1P14902 403 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 ZNF23P17027 643 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 CLCN7P51798 805 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 OR4D2P58180 307 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 MTPNP58546 118 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 ATP6V0D1P61421 351 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 OTUD3Q5T2D3 398 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 NANOGP8Q6NSW7 305 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 FAM117BQ6P1L5 589 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 IL27RAQ6UWB1 636 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS52-217ENST00000478934 MBOAT1Q6ZNC8 495 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 GPRIN3Q6ZVF9 776 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 CLVS1Q8IUQ0 354 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 RIN3Q8TB24 985 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 PROKR1Q8TCW9 393 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 HOPXQ9BPY8 73 aaPredicted RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 CLSTN3Q9BQT9 956 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 TTLL2Q9BWV7 592 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 ALG2Q9H553 416 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 NANOGQ9H9S0 305 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 MRPL40Q9NQ50 206 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 FARSBQ9NSD9 589 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 PNPLA3Q9NST1 481 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
VPS52-217ENST00000478934 CNOT11Q9UKZ1 510 aaKnown RBP10.68□□□□□ -0.7
VPS52-217ENST00000478934 ILVBLA1L0T0 632 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 CCDC154A6NI56 674 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 MATN4O95460 622 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 PRR35P0CG20 571 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 G6PDP11413 515 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 POLR2JP52435 117 aaKnown RBP10.67□□□□□ -0.7
VPS52-217ENST00000478934 KCNK10P57789 538 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 HPCAP84074 193 aa10.67□□□□□ -0.7
VPS52-217ENST00000478934 PPP1R8Q12972 351 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms