RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 AGGF1Q8N302 714 aaeCLIP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SDR16C5Q8N3Y7 309 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 MCUQ8NE86 351 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 GPR156Q8NFN8 814 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 CCDC74AQ96AQ1 378 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 MFSD3Q96ES6 412 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SGF29Q96ES7 293 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 DCUN1D1Q96GG9 259 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PWWP2AQ96N64 755 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 C19orf43Q9BQ61 176 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SYNDIG1Q9H7V2 258 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 XAB2Q9HCS7 855 aaKnown RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PRDM8Q9NQV8 689 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SAMD15Q9P1V8 674 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 TBC1D29Q9UFV1 150 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 CDC23Q9UJX2 597 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PCDHGA1Q9Y5H4 931 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 CABIN1Q9Y6J0 2220 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SPEGQ15772 3267 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 TRBV5-4A0A0C4DH59 114 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 PDZK1P1A8MUH7 402 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 EFCAB8A8MWE9 144 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 GPR37O15354 613 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 POP7O75817 140 aaKnown RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 DKK1O94907 266 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 MLNP12872 115 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 IVDP26440 423 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 PMLP29590 882 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 DRG2P55039 364 aaKnown RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 ACVR1Q04771 509 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 HLTFQ14527 1009 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 OGFOD3Q6PK18 319 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 C11orf96Q7Z7L8 435 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 LDB1Q86U70 411 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 Q8N9G6 341 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 OR4L1Q8NH43 312 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 MAPK15Q8TD08 544 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 ADAMTS14Q8WXS8 1223 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 KIFC1Q9BW19 673 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 DPH5Q9H2P9 285 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 IL1RAPL1Q9NZN1 696 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 NCKIPSDQ9NZQ3 722 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 MARCH4Q9P2E8 410 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-222ENST00000478095 KLK13Q9UKR3 277 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 RIMKLBQ9ULI2 386 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 SOX13Q9UN79 622 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 SNX24Q9Y343 169 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 MAD1L1Q9Y6D9 718 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 RNF215Q9Y6U7 377 aa10.11□□□□□ -0.79
HDAC6-222ENST00000478095 SPTBN2O15020 2390 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 FAM149AA5PLN7 773 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SDR42E2A6NKP2 422 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 CFAP99D6REC4 459 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 GOLGA8KD6RF30 607 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 GOLGA8TH3BQL2 631 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SGTAO43765 313 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 OR1I1O60431 355 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SEC31AO94979 1220 aaKnown RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 VAPBO95292 243 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 TRIM16O95361 564 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 RALBP11234 206 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ATP1B2P14415 290 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ARNTP27540 789 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 RPL10P27635 214 aaKnown RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 MAGEA3P43357 314 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 RPL21P46778 160 aaKnown RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ITGA8P53708 1063 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ILKQ13418 452 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 BIRC2Q13490 618 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 BCL7AQ4VC05 210 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 FASTKD1Q53R41 847 aaKnown RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 HES3Q5TGS1 186 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 HIBCHQ6NVY1 386 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 FAM83HQ6ZRV2 1179 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 RAB44Q7Z6P3 723 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 PCGF5Q86SE9 256 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 AMZ2Q86W34 360 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ZNF761Q86XN6 746 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ARL14Q8N4G2 192 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 CLDN19Q8N6F1 224 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SLC37A2Q8TED4 501 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 PEX13Q92968 403 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 NAT6Q93015 286 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SNF8Q96H20 258 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 CCDC3Q9BQI4 270 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 SCNM1Q9BWG6 230 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 ABCG4Q9H172 646 aa10.1□□□□□ -0.79
HDAC6-222ENST00000478095 MRM3Q9HC36 420 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms