RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 YWHAQP27348 245 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MAT2AP31153 395 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 OTX2P32243 289 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SERPINB6P35237 376 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RORAP35398 523 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MAGEA1P43355 309 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CRKLP46109 303 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 GABRB2P47870 512 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ARHGDIAP52565 204 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ACTR2P61160 394 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RAP2BP61225 183 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 STX1BP61266 288 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SCN1BQ07699 218 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TBL3Q12788 808 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TARDBPQ13148 414 aaKnown RBP eCLIP3.51□□□□□ -1.855e-8■□□□□ 11
FNDC3B-209ENST00000478016 AIMP2Q13155 320 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 DYRK1AQ13627 763 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 IL10RAQ13651 578 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RAB39AQ14964 217 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CLCA4Q14CN2 919 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TBCEQ15813 527 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TBCCQ15814 346 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CSRP2Q16527 193 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SGCAQ16586 387 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TIGD6Q17RP2 521 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SMTNL2Q2TAL5 461 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 KLHL40Q2TBA0 621 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 KLHL38Q2WGJ6 581 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD20A4Q4UJ75 823 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 PLEKHO1Q53GL0 409 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 KLHL26Q53HC5 615 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD20A8PQ5CZ79 823 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RABL3Q5HYI8 236 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 NHSL2Q5HYW2 709 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD20A2Q5SQ80 823 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD20A1Q5TYW2 823 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD20A3Q5VUR7 823 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD40Q6AI12 368 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM122CQ6P4D5 195 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TTC23LQ6PF05 361 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MFSD7Q6UXD7 560 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CLEC17AQ6ZS10 378 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CCDC121Q6ZUS5 278 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SEM1Q6ZVN7 128 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKS1BQ7Z6G8 1248 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TBC1D10CQ8IV04 446 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SFRP1Q8N474 314 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MINDY2Q8NBR6 621 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RNF169Q8NCN4 708 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANGPTL6Q8NI99 470 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 UBLCP1Q8WVY7 318 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 IFT81Q8WYA0 676 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 RAPGEF4Q8WZA2 1011 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CIDECQ96AQ7 238 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 REXO5Q96IC2 774 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ELMO2Q96JJ3 720 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKRD27Q96NW4 1050 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 DCLRE1CQ96SD1 692 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 P2RX7Q99572 595 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CGRRF1Q99675 332 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC29A1Q99808 456 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ACBD6Q9BR61 282 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 NDC1Q9BTX1 674 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TUBB6Q9BUF5 446 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ZSCAN5AQ9BUG6 496 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 C6orf62Q9GZU0 229 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 GBA3Q9H227 469 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 OR52A5Q9H2C5 316 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 LRMDAQ9H2I8 198 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ZSCAN16Q9H4T2 348 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 SH2D4AQ9H788 454 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 IL21RQ9HBE5 538 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 FBRSL1Q9HCM7 1045 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MRPS30Q9NP92 439 aaKnown RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 LZTFL1Q9NQ48 299 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 PRMT8Q9NR22 394 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ABCB8Q9NUT2 735 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 HCFC1R1Q9NWW0 138 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ARHGEF38Q9NXL2 777 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 BARHL2Q9NY43 387 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNHIT2Q9UHR6 403 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 CYTH4Q9UIA0 394 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 DNPEPQ9ULA0 475 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ERVK-11Q9UQG0 969 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MTMR6Q9Y217 621 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 TBC1D30Q9Y2I9 924 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 PCDHA3Q9Y5H8 950 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.51□□□□□ -1.859e-8■□□□□ 11
FNDC3B-209ENST00000478016 SNX13Q9Y5W8 968 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 U3KQV3 271 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 IQSEC2Q5JU85 1478 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 LRRC9Q6ZRR7 1453 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 MED1Q15648 1581 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 VWDEQ8N2E2 1590 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 UGGT1Q9NYU2 1555 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 NPC1L1Q9UHC9 1359 aa3.51□□□□□ -1.85
FNDC3B-209ENST00000478016 ACEP12821 1306 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 A0A075B6Q4 140 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TRIM49BA6NDI0 452 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms