RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 UTS2BQ765I0 119 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 JAZF1Q86VZ6 243 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 ZBTB44Q8NCP5 570 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 MUL1Q969V5 352 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 NXNL1Q96CM4 212 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 CINPQ9BW66 212 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 BCO2Q9BYV7 579 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 NOL11Q9H8H0 719 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 TRIM45Q9H8W5 580 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 SIX4Q9UIU6 781 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 ANAPC2Q9UJX6 822 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 DERAQ9Y315 318 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 HRH3Q9Y5N1 445 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 A3GALT2U3KPV4 340 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 PMF1-BGLAPU3KQ54 211 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 CITO14578 2027 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 TRAV20A0A0B4J274 112 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 HAS3O00219 553 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 AIM2O14862 343 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GPR32O75388 356 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 ALBP02768 609 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 KRT1P04264 644 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 TP53P04637 393 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 HTR1BP28222 390 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GBX2P52951 348 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 SNX16P57768 344 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 KLF1Q13351 362 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 HIF1AQ16665 826 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GTDC1Q4AE62 458 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GPAT3Q53EU6 434 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 CATSPEREQ5SY80 951 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 FAXCQ5TGI0 409 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 MROH9Q5TGP6 573 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 RCOR2Q8IZ40 523 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PHTF2Q8N3S3 785 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DHRSXQ8N5I4 330 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 OR4M1Q8NGD0 313 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 OR10T2Q8NGX3 314 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 SVIPQ8NHG7 77 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 RAET1EQ8TD07 263 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DNAJA4Q8WW22 397 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 APOL4Q9BPW4 351 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 MECRQ9BV79 373 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 C20orf27Q9GZN8 174 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 MMP27Q9H306 513 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 COPS3Q9UNS2 423 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 CDY2AQ9Y6F7 541 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 CA12O43570 354 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DCXO43602 365 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 INHBAP08476 426 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DARSP14868 501 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 TM4SF4P48230 202 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 FCGRTP55899 365 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GABARAPL2P60520 117 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 RAB14P61106 215 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 ABCE1P61221 599 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PCDH1Q08174 1060 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 STXBP5Q5T5C0 1151 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 TTC39BQ5VTQ0 682 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 PMF1Q6P1K2 205 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DRICH1Q6PGQ1 229 aaPredicted RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 SLC7A6Q92536 515 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 RNF34Q969K3 372 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 WDR41Q9HAD4 459 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 DPP3Q9NY33 737 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 MGAMO43451 1857 aa12.54□□□□□ -0.4
RTFDC1-207ENST00000477573 C9IYK1 514 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 H0YAE9 185 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 DUSP11O75319 330 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 TADA2AO75478 443 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ZMPSTE24O75844 475 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PROSCO94903 275 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 HSMCR30P0CW71 290 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 SRCP12931 536 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms