RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MBOAT4Q96T53 435 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 BTBD2Q9BX70 525 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 OSBPL10Q9BXB5 764 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 DNAJB9Q9UBS3 223 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 DNAJC15Q9Y5T4 150 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 A3GALT2U3KPV4 340 aa15.12■□□□□ 0.01
CLSTN1-205ENST00000477264 G3V2T6 193 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PIP5K1BO14986 540 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 HUS1O60921 280 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 GPR32O75388 356 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 MT-CO1P00395 513 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 KRT8P05787 483 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 ASGR1P07306 291 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 ANXA6P08133 673 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 NR4A1P22736 598 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 FADDQ13158 208 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 KCNA10Q16322 511 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 AMHR2Q16671 573 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PYCR3Q53H96 274 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 UNC50Q53HI1 259 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 RNF180Q86T96 592 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 TMEM199Q8N511 208 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 SETD9Q8NE22 299 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 WNT8BQ93098 351 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PHF21BQ96EK2 531 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 REXO5Q96IC2 774 aaKnown RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 C17orf80Q9BSJ5 609 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 UGT2B28Q9BY64 529 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 TREX1Q9NSU2 369 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 DERAQ9Y315 318 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 GPR45Q9Y5Y3 372 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PDCD11Q14690 1871 aaKnown RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 NOTOA8MTQ0 251 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 ARF4P18085 180 aaPredicted RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PPP2R2BQ00005 443 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 CLCQ05315 142 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PCBP1Q15365 356 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■■ 32.7
CLSTN1-205ENST00000477264 MEP1AQ16819 746 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 CTU2Q2VPK5 515 aaKnown RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 RABL3Q5HYI8 236 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 ZNF691Q5VV52 312 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 TAS2R42Q7RTR8 314 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 TMEM130Q8N3G9 435 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 DNAJB14Q8TBM8 379 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 FAM149B1Q96BN6 582 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 OSMRQ99650 979 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 CLSTN3Q9BQT9 956 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 MMP27Q9H306 513 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 CCDC177Q9NQR7 707 aaPredicted RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 INTS6Q9UL03 887 aaKnown RBP15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 PMF1-BGLAPU3KQ54 211 aa15.11■□□□□ 0.01
CLSTN1-205ENST00000477264 TSPAN1O60635 241 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 CST5P28325 142 aaPredicted RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 HOXC8P31273 242 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TRPC1P48995 793 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 PLK1P53350 603 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 GEMP55040 296 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TUBA1BP68363 451 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 VAC14Q08AM6 782 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 ZC3H12BQ5HYM0 836 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 SYT6Q5T7P8 510 aaPredicted RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 GLYATQ6IB77 296 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 ESRP1Q6NXG1 681 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TUBA1AQ71U36 451 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 SNX29P2Q8IUI4 249 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TP53INP2Q8IXH6 220 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 LRRC52Q8N7C0 313 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 KLHDC9Q8NEP7 349 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 PSMA8Q8TAA3 256 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 ITFG1Q8TB96 612 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 SGCDQ92629 289 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 POP5Q969H6 163 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TUBGCP3Q96CW5 907 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 SLIRPQ9GZT3 109 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 CCNB1IP1Q9NPC3 277 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 AIG1Q9NVV5 245 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 POLG2Q9UHN1 485 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 OSGIN1Q9UJX0 560 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 TPRKBQ9Y3C4 175 aa15.1■□□□□ 0.01
CLSTN1-205ENST00000477264 FAM92AA1XBS5 289 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 CCDC154A6NI56 674 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 MAN1A2O60476 641 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 DLGAP3O95886 979 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 INHAP05111 366 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 HGFP14210 728 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 CHRM3P20309 590 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 GRK4P32298 578 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 ADRA1BP35368 520 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 MTHFRP42898 656 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 ST13P50502 369 aaKnown RBP15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 GRB7Q14451 532 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 PLD3Q8IV08 490 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 CRYBG2Q8N1P7 616 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 KIF12Q96FN5 646 aa15.09■□□□□ 0.01
CLSTN1-205ENST00000477264 CCDC115Q96NT0 180 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms