RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 PPP2R1BP30154 601 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CORO1AP31146 461 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 MCM7P33993 719 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CASP3P42574 277 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CDKN2CP42773 168 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PAFAH1B1P43034 410 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MCAMP43121 646 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MAGEA6P43360 314 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 GABRB2P47870 512 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SLC11A1P49279 550 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CARSP49589 748 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RGS6P49758 472 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NT5C2P49902 561 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ERFP50548 548 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 HLCSP50747 726 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SLC5A3P53794 718 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ATXN3P54252 364 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 OAZ1P54368 228 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PRMT2P55345 433 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OR2B6P58173 313 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SELENOVP59797 346 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ACTR3P61158 418 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 COPZ1P61923 177 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 RPS26P62854 115 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 TRA2BP62995 288 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 DSC1Q08554 894 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MGAT5Q09328 741 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ELP6Q0PNE2 266 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 KCNMA1Q12791 1236 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 GAGE1Q13065 139 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 GPS1Q13098 491 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PRKAA1Q13131 559 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 RPA4Q13156 261 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NOGQ13253 232 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NCOA4Q13772 614 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZNF169Q14929 603 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 PLCL1Q15111 1095 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NECTIN1Q15223 517 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 POU4F3Q15319 338 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DLG2Q15700 870 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PNLIPRP3Q17RR3 467 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TYSND1Q2T9J0 566 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TMEM35AQ53FP2 167 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 HSD17B12Q53GQ0 312 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZNF311Q5JNZ3 666 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 EOGTQ5NDL2 527 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 FAM26FQ5R3K3 315 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PPM1LQ5SGD2 360 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DNLZQ5SXM8 178 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PDZK1Q5T2W1 519 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 HACD4Q5VWC8 232 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PAPD7Q5XG87 772 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 FAM91A1Q658Y4 838 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 LRRC66Q68CR7 880 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ARHGAP17Q68EM7 881 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OR5M10Q6IEU7 315 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TYW3Q6IPR3 259 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 KIAA1161Q6NSJ0 714 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NANOGP8Q6NSW7 305 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZNF544Q6NX49 715 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 C1orf94Q6P1W5 598 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CNKSR3Q6P9H4 555 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TMEM65Q6PI78 240 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TSSK4Q6SA08 328 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 UGT2A3Q6UWM9 527 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 C11orf57Q6ZUT1 292 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 USP49Q70CQ1 688 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 USP45Q70EL2 814 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 FKBP9P1Q75LS8 142 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MAEAQ7L5Y9 396 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CHST15Q7LFX5 561 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RRM2BQ7LG56 351 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DYMQ7RTS9 669 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 IQCHQ86VS3 1027 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PDSS2Q86YH6 399 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CCDC71Q8IV32 467 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 HERC6Q8IVU3 1022 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 GPALPP1Q8IXQ4 340 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CENPLQ8N0S6 344 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 SPAG16Q8N0X2 631 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DEPDC4Q8N2C3 294 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 AOPEPQ8N6M6 819 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 C1orf52Q8N6N3 182 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 BEND7Q8N7W2 519 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 PI4KAP1Q8N8J0 262 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ATG16L2Q8NAA4 619 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 KDM1BQ8NB78 822 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CLRN3Q8NCR9 226 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 FAM156AQ8NDB6 213 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PAPD5Q8NDF8 572 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RBM15BQ8NDT2 890 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 FBXO22Q8NEZ5 403 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 Q8NFD4 153 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OR52M1Q8NGK5 317 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OR2L8Q8NGY9 312 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZFP28Q8NHY6 868 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TBC1D16Q8TBP0 767 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms