RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 ZNF548Q8NEK5 533 aaPredicted RBP21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 LPGAT1Q92604 370 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 SGF29Q96ES7 293 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 ZNF514Q96K75 400 aaPredicted RBP21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 TXLNGYQ9BZA5 131 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 TMEM168Q9H0V1 697 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 PPANQ9NQ55 473 aaKnown RBP21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 SPASTQ9UBP0 616 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 FBXO5Q9UKT4 447 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 GPR34Q9UPC5 381 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 PRSS21Q9Y6M0 314 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 RIF1Q5UIP0 2472 aaKnown RBP21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 FAM186AA6NE01 2351 aa21.87■■□□□ 1.09
MCF2L2-209ENST00000475664 OR2AG2A6NM03 316 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 NDUFS3O75489 264 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 S1PR4O95977 384 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 C1QAP02745 245 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 ZNF7P17097 686 aaPredicted RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 BNIP3Q12983 259 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 NAA30Q147X3 362 aaPredicted RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 PRRT3Q5FWE3 981 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 UBAP2Q5T6F2 1119 aaKnown RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 TEDDM1Q5T9Z0 273 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 C11orf96Q7Z7L8 435 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 C2CD4AQ8NCU7 369 aaPredicted RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 GABPB2Q8TAK5 448 aaPredicted RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 SAP25Q8TEE9 199 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 CLPBQ9H078 707 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 P2RY12Q9H244 342 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 TMEM9BQ9NQ34 198 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 TM7SF3Q9NS93 570 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 INTS10Q9NVR2 710 aaKnown RBP21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 SLC17A6Q9P2U8 582 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 GPSM3Q9Y4H4 160 aa21.86■■□□□ 1.09
MCF2L2-209ENST00000475664 PRMT5O14744 637 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 PFDN6O15212 129 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 KMOO15229 486 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 PCDHGA12O60330 932 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 AP2A2O94973 939 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 CELA2BP08218 269 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 F7P08709 466 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 CTSEP14091 401 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 RPS3P23396 243 aaKnown RBP eCLIP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 DGKAP23743 735 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 PRLHRP49683 370 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 MPP1Q00013 466 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 ZNF789Q5FWF6 425 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 KIAA0408Q6ZU52 694 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 FSTL5Q8N475 847 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 VPS37BQ9H9H4 285 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 FBXO6Q9NRD1 293 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 SMYD2Q9NRG4 433 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 UCKL1Q9NWZ5 548 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 VPS9D1Q9Y2B5 631 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 PLEKHM1Q9Y4G2 1056 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 ST14Q9Y5Y6 855 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 ZNF292O60281 2723 aa21.85■■□□□ 1.09
MCF2L2-209ENST00000475664 AQP9O43315 295 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 MCM3P25205 808 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 STX2P32856 288 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 ADARP55265 1226 aaKnown RBP21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 C1orf61Q13536 156 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 LRP8Q14114 963 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 ELOCQ15369 112 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 TCEA2Q15560 299 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 CHST15Q7LFX5 561 aaPredicted RBP21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 GALNT7Q86SF2 657 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 LRRC6Q86X45 466 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 SLC25A45Q8N413 288 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 BEND7Q8N7W2 519 aaPredicted RBP21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 CCL4L1Q8NHW4 92 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 GPBAR1Q8TDU6 330 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 LMX1AQ8TE12 382 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 LINC00615Q96LM1 132 aaPredicted RBP21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 TIMM29Q9BSF4 260 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 FUT8Q9BYC5 575 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 PARD6BQ9BYG5 372 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 ZFATQ9P243 1243 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 SLC23A2Q9UGH3 650 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 PCDHGB2Q9Y5G2 931 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 DNMT3AQ9Y6K1 912 aaPredicted RBP21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 CSNK1G3Q9Y6M4 447 aa21.84■■□□□ 1.09
MCF2L2-209ENST00000475664 UBA6A0AVT1 1052 aaPredicted RBP21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 FAM159BA6NKW6 160 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 QSOX1O00391 747 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 GDF9O60383 454 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 ACP5P13686 325 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 LEPRP48357 1165 aaKnown RBP21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 CTBSQ01459 385 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 PLA2G4EQ3MJ16 856 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 TRMT10CQ7L0Y3 403 aaKnown RBP21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 NRROSQ86YC3 692 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 GATAD2AQ86YP4 633 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 FBF1Q8TES7 1133 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 BIRC8Q96P09 236 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 GSDMCQ9BYG8 508 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 RAB21Q9UL25 225 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 CRYL1Q9Y2S2 319 aa21.83■■□□□ 1.09
MCF2L2-209ENST00000475664 GVINP1Q7Z2Y8 2422 aa21.82■■□□□ 1.08
MCF2L2-209ENST00000475664 PRR19A6NJB7 356 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms