RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LIASO43766 372 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 NUAK1O60285 661 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 DNAJC6O75061 913 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 IFNB1P01574 187 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 GPR89BP0CG08 455 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 THRAP10827 490 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 HLA-DPA1P20036 260 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 STIP1P31948 543 aaKnown RBP14.92□□□□□ -0.02
VARS-223ENST00000474643 CSF2RBP32927 897 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 DCDC1P59894 354 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 ETF1P62495 437 aaKnown RBP14.92□□□□□ -0.02
VARS-223ENST00000474643 SEPT7Q16181 437 aaKnown RBP14.92□□□□□ -0.02
VARS-223ENST00000474643 SIRPB2Q5JXA9 342 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 ZNF574Q6ZN55 896 aaPredicted RBP14.92□□□□□ -0.02
VARS-223ENST00000474643 LRRTM4Q86VH4 590 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 TRAPPC5Q8IUR0 188 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 TAB3Q8N5C8 712 aaPredicted RBP14.92□□□□□ -0.02
VARS-223ENST00000474643 TRAM1L1Q8N609 369 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 CCDC89Q8N998 374 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 BLOC1S5Q8TDH9 187 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 TTC9Q92623 222 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 GLYATL1Q969I3 302 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 MRGPRX2Q96LB1 330 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 B3GNT4Q9C0J1 378 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 TRIM39Q9HCM9 518 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 TMEM9Q9P0T7 183 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 ATXN10Q9UBB4 475 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 CPNE7Q9UBL6 633 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 DNAJC16Q9Y2G8 782 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 PCDHGA4Q9Y5G9 962 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 LOC285095A0A1B0GVY8 99 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 KMOO15229 486 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 AGTP01019 485 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 VIPP01282 170 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 EPOP01588 193 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 FGF3P11487 239 aaPredicted RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 PLA2G2AP14555 144 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 ZNF8P17098 575 aaPredicted RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 CHRNA4P43681 627 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 LMAN1P49257 510 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 EPHA4P54764 986 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 GNG11P61952 73 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 SLC1A5Q15758 541 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 PARP6Q2NL67 630 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 P3H1Q32P28 736 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 ZNF648Q5T619 568 aaPredicted RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 IYDQ6PHW0 289 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 WDR74Q6RFH5 385 aaPredicted RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 PCSK4Q6UW60 755 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 GSTA5Q7RTV2 222 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 PRICKLE2Q7Z3G6 844 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 GLT6D1Q7Z4J2 308 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 PLXDC1Q8IUK5 500 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 GPR26Q8NDV2 337 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 EXTL1Q92935 676 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 KIAA1143Q96AT1 154 aaPredicted RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 PBKQ96KB5 322 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 APOL2Q9BQE5 337 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 DDA1Q9BW61 102 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 ZCCHC2Q9C0B9 1178 aaKnown RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 EPB41L1Q9H4G0 881 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 HACD3Q9P035 362 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 CNOT6Q9ULM6 557 aaKnown RBP14.91□□□□□ -0.02
VARS-223ENST00000474643 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
VARS-223ENST00000474643 B4E171 279 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 E7EVH7 732 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 J3QKU1 62 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 VEGFDO43915 354 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 RASSF9O75901 435 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 CDK14O94921 469 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 EML2O95834 649 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 ITGB2P05107 769 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 AMD1P17707 334 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 TSPAN7P41732 249 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 GDF10P55107 478 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 SRSF6Q13247 344 aaKnown RBP14.9□□□□□ -0.02
VARS-223ENST00000474643 CCNG2Q16589 344 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.9□□□□□ -0.02
VARS-223ENST00000474643 CEACAM20Q6UY09 585 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 CACNA2D3Q8IZS8 1091 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 TEFMQ96QE5 360 aaKnown RBP14.9□□□□□ -0.02
VARS-223ENST00000474643 WDR24Q96S15 920 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 NAP1L3Q99457 506 aaPredicted RBP14.9□□□□□ -0.02
VARS-223ENST00000474643 TBL1YQ9BQ87 522 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 TRABDQ9H4I3 376 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 BPIFA1Q9NP55 256 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 PRDM8Q9NQV8 689 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 HOMER3Q9NSC5 361 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 PKP3Q9Y446 797 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 PCDHGA3Q9Y5H0 932 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 B3GALT1Q9Y5Z6 326 aa14.9□□□□□ -0.02
VARS-223ENST00000474643 PSMD3O43242 534 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 SLC28A2O43868 658 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 MTX2O75431 263 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 SFTPCP11686 197 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 BPIP17213 487 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 HALP42357 657 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 NFATC3Q12968 1075 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms