RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CCDC22O60826 627 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 OR7A10O76100 309 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 CRYABP02511 175 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 IQCF3P0C7M6 154 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 GIMD1P0DJR0 217 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 NQO2P16083 231 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 DDX6P26196 483 aaKnown RBP eCLIP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ACVR2AP27037 513 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 CRABP1P29762 137 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 SCTRP47872 440 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 DBPQ10586 325 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 KCNMA1Q12791 1236 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 OVGP1Q12889 678 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TSPAN31Q12999 210 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 NFYCQ13952 458 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 SNAPC1Q16533 368 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZMAT1Q5H9K5 638 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 AFTPHQ6ULP2 937 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 DCDC5Q6ZRR9 648 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 FRA10AC1Q70Z53 315 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 GDPD3Q7L5L3 318 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 CYP4Z1Q86W10 505 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 SEPT12Q8IYM1 358 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TOP6BLQ8N6T0 577 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 OR5D18Q8NGL1 313 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 OR4C15Q8NGM1 316 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 PYDC1Q8WXC3 89 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 REPS1Q96D71 796 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 FCRL3Q96P31 734 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZBTB18Q99592 522 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 LGR4Q9BXB1 951 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 SLC19A3Q9BZV2 496 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 GSX1Q9H4S2 264 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 RANBP3Q9H6Z4 567 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ECT2Q9H8V3 914 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ETNK1Q9HBU6 452 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 LTB4R2Q9NPC1 389 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 PANK4Q9NVE7 773 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 NCKIPSDQ9NZQ3 722 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ARHGAP20Q9P2F6 1191 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 NXF1Q9UBU9 619 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 NSFL1CQ9UNZ2 370 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ST14Q9Y5Y6 855 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 LMTK3Q96Q04 1460 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 UBE4BO95155 1302 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TNRQ92752 1358 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 CCDC7Q96M83 1385 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 TRBV23-1A0A0A0MS06 115 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 EDDM13A0A1B0GTR0 161 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 GNG14A0A1W2PPG7 69 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 MEI4A8MW99 385 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 H3BML4 177 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ACOX3O15254 700 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 SERPINI2O75830 405 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 FAM155BO75949 473 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 KRT36O76013 467 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 DDAH2O95865 285 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 KLKB1P03952 638 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 PCCBP05166 539 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 MYF5P13349 255 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ADRB3P13945 408 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ATP2A2P16615 1042 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZNF8P17098 575 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 TGFBR2P37173 567 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 AFMP43652 599 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 OR3A3P47888 321 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 LIG4P49917 911 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ATP11AP98196 1134 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 DSG1Q02413 1049 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 MERTKQ12866 999 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 MAB21L1Q13394 359 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 MTMR2Q13614 643 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TSTA3Q13630 321 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 TUBB2AQ13885 445 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 R3HDM1Q15032 1099 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 ANO6Q4KMQ2 910 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TNFAIP8L3Q5GJ75 292 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZNF530Q6P9A1 599 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 IQCHQ86VS3 1027 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 FAM185AQ8N0U4 392 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 C19orf18Q8NEA5 215 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 RNASE8Q8TDE3 154 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 HSD17B8Q92506 261 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 PIGKQ92643 395 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TPD52L3Q96J77 140 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 LRIG1Q96JA1 1093 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 FAM84BQ96KN1 310 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 LURAP1Q96LR2 239 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZNF385AQ96PM9 386 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 XPO6Q96QU8 1125 aaKnown RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 TMEM246Q9BRR3 403 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TUBB2BQ9BVA1 445 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 C11orf49Q9H6J7 331 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 WDR55Q9H6Y2 383 aaPredicted RBP3.45□□□□□ -1.86
UBR3-208ENST00000474426 MINDY3Q9H8M7 445 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 COG4Q9H9E3 785 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 EXD2Q9NVH0 621 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 WNT16Q9UBV4 365 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 ZFR2Q9UPR6 939 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms