RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 RUSC2Q8N2Y8 1516 aa3.17□□□□□ -1.9
ECHDC1-213ENST00000474240 TRIP12Q14669 1992 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 A0A1W2PP11 408 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 TMEM8BA6NDV4 472 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 H0YIN7 160 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 H3BQ06 376 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 CAPN9O14815 690 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 EIF3DO15371 548 aaKnown RBP eCLIP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 NDUFS4O43181 175 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 ZBTB43O43298 467 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF432O94892 652 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 IGHV4-39P01824 125 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 VPREB1P12018 145 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 ITGA2P17301 1181 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 GM2AP17900 193 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 SAT1P21673 171 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MCCP23508 829 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 HOXD13P35453 343 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 FUT6P51993 359 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MFAP4P55083 255 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 PHEXP78562 749 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 CREB5Q02930 508 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 CCDC6Q16204 474 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MEP1AQ16819 746 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 RILPL1Q5EBL4 403 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 RAB41Q5JT25 222 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 NSUN5P2Q63ZY6 315 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 OR7E24Q6IFN5 339 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 GSG1LQ6UXU4 331 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 PACS1Q6VY07 963 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 TRMT1LQ7Z2T5 733 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 CUZD1Q86UP6 607 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 NR2C2APQ86WQ0 139 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 DCUN1D3Q8IWE4 304 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 ACVR1CQ8NER5 493 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 BBS10Q8TAM1 723 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 GSDMBQ8TAX9 411 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 JAKMIP2Q96AA8 810 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 LRRC59Q96AG4 307 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 INPP4AQ96PE3 977 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 SDF4Q9BRK5 362 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MMP28Q9H239 520 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 HRH4Q9H3N8 390 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 RAD21L1Q9H4I0 556 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MAP3K20Q9NYL2 800 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 MARCH4Q9P2E8 410 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 SUCLA2Q9P2R7 463 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 DNAJB4Q9UDY4 337 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 SEC63Q9UGP8 760 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 RALYQ9UKM9 306 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 YIPF1Q9Y548 306 aa3.16□□□□□ -1.9
ECHDC1-213ENST00000474240 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 AGAP14A8MT82 685 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 LDLRP01130 860 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CRYAAP02489 173 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CSH1P0DML2 217 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CSH2P0DML3 217 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 GARSP41250 739 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC15A1P46059 708 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 PNLIPRP2P54317 469 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 NTRK2Q16620 822 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 MEA1Q16626 185 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CCDC96Q2M329 555 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 RAB6CQ53S08 254 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 KRT79Q5XKE5 535 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 KCTD8Q6ZWB6 473 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 Q75L30 129 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 SZRD1Q7Z422 152 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 PCGF5Q86SE9 256 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 LONP2Q86WA8 852 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 TMPRSS12Q86WS5 348 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 SCYL3Q8IZE3 742 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 TAGAPQ8N103 731 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 RASGEF1CQ8N431 466 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 HJURPQ8NCD3 748 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 MCUQ8NE86 351 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 OR13A1Q8NGR1 328 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 SMPDL3BQ92485 455 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CALML4Q96GE6 196 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 CEP295NLQ96MC4 621 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF583Q96ND8 569 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 SMC6Q96SB8 1091 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 POLR3CQ9BUI4 534 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 RTN4RQ9BZR6 473 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 RAB6CQ9H0N0 254 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 DONSONQ9NYP3 566 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF215Q9UL58 517 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 TCF19Q9Y242 345 aa3.15□□□□□ -1.91
ECHDC1-213ENST00000474240 ARHGEF40Q8TER5 1519 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A0B4J293 547 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 CTAGE9A4FU28 777 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 K7ENM7 598 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 P2RY10O00398 339 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 DOK2O60496 412 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF217O75362 1048 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 IGLV2-11P01706 119 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 CTAGE8P0CG41 777 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 PAX1P15863 534 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 MAPK4P31152 587 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms