RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CST1P01037 141 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 IL6P05231 212 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GSNP06396 782 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MTHFD1P11586 935 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 TYMPP19971 482 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CD40LGP29965 261 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 PIK3CGP48736 1102 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CCR3P51677 355 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 HNRNPFP52597 415 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 PLA2G16P53816 162 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 IL2P60568 153 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 EIF4EBP2Q13542 120 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 PLCL1Q15111 1095 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 Q3C1V9 767 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SIRPB2Q5JXA9 342 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CACHD1Q5VU97 1274 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GTF2IRD2BQ6EKJ0 949 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TTC23LQ6PF05 361 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CYHR1Q6ZMK1 362 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 BHLHA9Q7RTU4 235 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 PRSS48Q7RTY5 328 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GTF2IRD2Q86UP8 949 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GPSM1Q86YR5 675 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.06□□□□□ -1.44
HERC4-209ENST00000473533 BPIFB6Q8NFQ5 453 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TADA1Q96BN2 335 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SLC47A1Q96FL8 570 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TRIB3Q96RU7 358 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 LHPPQ9H008 270 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 EHD1Q9H4M9 534 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SLC52A3Q9NQ40 469 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ADARB2Q9NS39 739 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 UXTQ9UBK9 157 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 NEU3Q9UQ49 428 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 FAM32AQ9Y421 112 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 A3GALT2U3KPV4 340 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 C17orf102A2RUQ5 167 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 HTR3EA5X5Y0 456 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 I6L893 689 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 M0QX08 132 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 KPNA6O60684 536 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 WDR47O94967 919 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 FUCA1P04066 466 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MATN1P21941 496 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 BAG6P46379 1132 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PSEN2P49810 448 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CLCN4P51793 760 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 POLD3Q15054 466 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 TIGD2Q4W5G0 525 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ATG9BQ674R7 924 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SULT1C3Q6IMI6 304 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ARHGAP36Q6ZRI8 547 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 GPRIN1Q7Z2K8 1008 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ADAMTSL2Q86TH1 951 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SLCO6A1Q86UG4 719 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MON1AQ86VX9 555 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SMG8Q8ND04 991 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 NEURL2Q9BR09 285 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MUC3BQ9H195 1237 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TRIT1Q9H3H1 467 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 TOR3AQ9H497 397 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 GOLGA2P5Q9HBQ8 144 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TNFRSF12AQ9NP84 129 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SEMA4BQ9NPR2 832 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 NLE1Q9NVX2 485 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 SMPD4Q9NXE4 827 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CD274Q9NZQ7 290 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MTRRQ9UBK8 725 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 BTRCQ9Y297 605 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CRYL1Q9Y2S2 319 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PAPPA2Q9BXP8 1791 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MIA3Q5JRA6 1907 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 UBA6A0AVT1 1052 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 ELOVL7A1L3X0 281 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TAF4O00268 1085 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PTGESO14684 152 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 LDB2O43679 373 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 RAMP2O60895 175 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TBX4P57082 545 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ECT2LQ008S8 904 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.05□□□□□ -1.44
HERC4-209ENST00000473533 KEAP1Q14145 624 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 OR4D1Q15615 310 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PLEKHG6Q3KR16 790 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 RABL3Q5HYI8 236 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 C6orf136Q5SQH8 315 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CHDHQ8NE62 594 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 DNAJB3Q8WWF6 145 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ISG20Q96AZ6 181 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 MAGEB10Q96LZ2 347 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 DACH2Q96NX9 599 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ALPK1Q96QP1 1244 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 FUNDC2Q9BWH2 189 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ACTR8Q9H981 624 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PARVBQ9HBI1 364 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ASIC5Q9NY37 505 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms