RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 HACD1B0YJ81 288 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 C21orf140B9A014 251 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 NKX2-8O15522 239 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
CHD3-209ENST00000473376 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
CHD3-209ENST00000473376 HLA-DPA1P20036 260 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 MPP3Q13368 585 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 ALS2CLQ60I27 953 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 AMZ2Q86W34 360 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 LRRN4Q8WUT4 740 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 CXorf40BQ96DE9 158 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 SLC41A2Q96JW4 573 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
CHD3-209ENST00000473376 ULBP3Q9BZM4 244 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 APMAPQ9HDC9 416 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 IL26Q9NPH9 171 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 IL17CQ9P0M4 197 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 TMPRSS11EQ9UL52 423 aa13.3□□□□□ -0.28
CHD3-209ENST00000473376 MFAP3LO75121 409 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
CHD3-209ENST00000473376 KRT1P04264 644 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 FECHP22830 423 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 SPAM1P38567 509 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 MAPK9P45984 424 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 GFERP55789 205 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 WNT3AP56704 352 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 TLE1Q04724 770 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 WASHC5Q12768 1159 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 XRCC4Q13426 336 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 GPR18Q14330 331 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 SLC1A5Q15758 541 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 PCSK7Q16549 785 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 SKOR2Q2VWA4 1001 aaPredicted RBP13.29□□□□□ -0.28
CHD3-209ENST00000473376 TFDP3Q5H9I0 405 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 TCTN3Q6NUS6 607 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 CRTC3Q6UUV7 619 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 MFSD7Q6UXD7 560 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 PPP1R3BQ86XI6 285 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 RFX6Q8HWS3 928 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 TTC30BQ8N4P2 665 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 SPATA22Q8NHS9 363 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 P3H4Q92791 437 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 GPR87Q9BY21 358 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 PDE7BQ9NP56 450 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 PADI1Q9ULC6 663 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 PKP3Q9Y446 797 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
CHD3-209ENST00000473376 AURKAO14965 403 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 CST8O60676 142 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 PMPCBO75439 489 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 NDUFA10O95299 355 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 PIRTP0C851 137 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 TYRP1P17643 537 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 OAS2P29728 719 aaKnown RBP13.28□□□□□ -0.28
CHD3-209ENST00000473376 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
CHD3-209ENST00000473376 FOXK1P85037 733 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 ACY1Q03154 408 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 FOXM1Q08050 763 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 KHDC1Q4VXA5 237 aaKnown RBP13.28□□□□□ -0.28
CHD3-209ENST00000473376 CACHD1Q5VU97 1274 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 METRNLQ641Q3 311 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 TRAPPC5Q8IUR0 188 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
CHD3-209ENST00000473376 KATNAL2Q8IYT4 538 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 RCOR2Q8IZ40 523 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 RNF25Q96BH1 459 aaPredicted RBP13.28□□□□□ -0.28
CHD3-209ENST00000473376 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 TGM7Q96PF1 710 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 PPP1R2P1Q96PQ5 205 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 OR6C1Q96RD1 312 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 CHP1Q99653 195 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 CEP41Q9BYV8 373 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 ACSL5Q9ULC5 683 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 POLHQ9Y253 713 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 DNAJC16Q9Y2G8 782 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHD3-209ENST00000473376 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
CHD3-209ENST00000473376 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 MKRN2OSH3BPM6 223 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 SPOPO43791 374 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 SPAG6O75602 509 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 POP7O75817 140 aaKnown RBP13.27□□□□□ -0.29
CHD3-209ENST00000473376 RASSF9O75901 435 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHD3-209ENST00000473376 COMTP21964 271 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 RPL10P27635 214 aaKnown RBP13.27□□□□□ -0.29
CHD3-209ENST00000473376 DLSTP36957 453 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 COPS2P61201 443 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 NFKB2Q00653 900 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms