RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 FIG4Q92562 907 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 CDCA5Q96FF9 252 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 TMEM19Q96HH6 336 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 MED30Q96HR3 178 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 DDOQ99489 341 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 MEIS3Q99687 375 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 APOL6Q9BWW8 343 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 HIPK2Q9H2X6 1198 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 UBTD1Q9HAC8 227 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 CRNNQ9UBG3 495 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-209ENST00000472044 HACL1Q9UJ83 578 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 ANAPC2Q9UJX6 822 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 PCDHGA5Q9Y5G8 931 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 RPS6KL1Q9Y6S9 549 aa3.73□□□□□ -1.81
PTCD3-209ENST00000472044 ZCWPW2A0A1B0GU75 182 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 hCG_1809904A0A1W2PP81 198 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 A0A1W2PPE2 198 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 A0A1W2PR64 198 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 TCRBV21S2A2A0A5A6 115 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 A6NL46 340 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 C4orf47A7E2U8 309 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 UBE2CO00762 179 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 DVL1O14640 695 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 SLC28A2O43868 658 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 LDB3O75112 727 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 CREG1O75629 220 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 ZBTB11O95625 1053 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 T-ENOLP0DO92 83 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 NMBRP28336 390 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 TNFRSF8P28908 595 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 LIG4P49917 911 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 ART1P52961 327 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 PPP2R2BQ00005 443 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 RUNX1T1Q06455 604 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 ADALQ6DHV7 355 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 ZNF517Q6ZMY9 492 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 C16orf82Q7Z2V1 217 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 TMPRSS12Q86WS5 348 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 MAP7D3Q8IWC1 876 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 OR10S1Q8NGN2 331 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 ARSGQ96EG1 525 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 THOC3Q96J01 351 aaKnown RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 DGAT2Q96PD7 388 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 NEK1Q96PY6 1258 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 HGH1Q9BTY7 390 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 KLHL4Q9C0H6 718 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 DDX31Q9H8H2 851 aaKnown RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 KLHL1Q9NR64 748 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 PPIEQ9UNP9 301 aaKnown RBP3.72□□□□□ -1.81
PTCD3-209ENST00000472044 B3GALT5Q9Y2C3 310 aa3.72□□□□□ -1.81
PTCD3-209ENST00000472044 A0A0G2JPF8 293 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 OR2M5A3KFT3 312 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ANKRD66B4E2M5 251 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 HNRNPCL3B7ZW38 293 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TMEM189-UBE2V1I3L0A0 370 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ZBTB43O43298 467 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ABCB1P08183 1280 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 FAM106CPP0CH98 169 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 HNRNPCL4P0DMR1 293 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 VPREB1P12018 145 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 HLA-DOBP13765 273 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ZNF23P17027 643 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 GM2AP17900 193 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 RELQ04864 619 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 AIMP1Q12904 312 aaKnown RBP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 FHL1Q13642 323 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 KRT33BQ14525 404 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 RASA2Q15283 850 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 KYNUQ16719 465 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 CRY2Q49AN0 593 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 FAM98BQ52LJ0 330 aaKnown RBP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TMEM35AQ53FP2 167 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 C9orf152Q5JTZ5 239 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ERMARDQ5T6L9 678 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 LRCH2Q5VUJ6 765 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 NADSYN1Q6IA69 706 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ASB18Q6ZVZ8 466 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 PLEKHM3Q6ZWE6 761 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 ARMC9Q7Z3E5 817 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 CEP57Q86XR8 500 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 C9orf106Q8NAJ2 232 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 KCTD6Q8NC69 237 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 KCNH5Q8NCM2 988 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TBC1D16Q8TBP0 767 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TAS1R2Q8TE23 839 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 NUDCD2Q8WVJ2 157 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 LPGAT1Q92604 370 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 SMC6Q96SB8 1091 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 CDRT15Q96T59 188 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 NEURL2Q9BR09 285 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 SYT17Q9BSW7 474 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 CHMP1AQ9HD42 196 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TCP11L1Q9NUJ3 509 aa3.71□□□□□ -1.82
PTCD3-209ENST00000472044 TAS2R14Q9NYV8 317 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms