RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 POLR1EQ9GZS1 481 aaKnown RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 SAMSN1Q9NSI8 373 aaKnown RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 AKAP9Q99996 3911 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 F8P00451 2351 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 KMOO15229 486 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 SLC25A14O95258 325 aaPredicted RBP18.62■□□□□ 0.57
SORT1-203ENST00000471996 PER3P56645 1201 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 GSDMDP57764 484 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 RPL26P61254 145 aaKnown RBP18.62■□□□□ 0.57
SORT1-203ENST00000471996 ZRSR2Q15696 482 aaKnown RBP18.62■□□□□ 0.57
SORT1-203ENST00000471996 ANKRD20A8PQ5CZ79 823 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 FAM69BQ5VUD6 431 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 ALG1LQ6GMV1 187 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 LCN10Q6JVE6 187 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 LRRTM4Q86VH4 590 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 OR8K5Q8NH50 307 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 CCHCR1Q8TD31 782 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 MAP3K3Q99759 626 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 TIMM29Q9BSF4 260 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 KCND1Q9NSA2 647 aa18.62■□□□□ 0.57
SORT1-203ENST00000471996 RPL26L1Q9UNX3 145 aaKnown RBP18.62■□□□□ 0.57
SORT1-203ENST00000471996 ADGRG4Q8IZF6 3080 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 MEN1O00255 615 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 LRRTM2O43300 516 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 CES1P23141 567 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 EEF1GP26641 437 aaKnown RBP18.61■□□□□ 0.57
SORT1-203ENST00000471996 ARL4AP40617 200 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
SORT1-203ENST00000471996 HSD11B2P80365 405 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 DPYSL2Q16555 572 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 ZNF569Q5MCW4 686 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 PLEKHS1Q5SXH7 462 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 PLEKHA7Q6IQ23 1121 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 POLNQ7Z5Q5 900 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 DSELQ8IZU8 1212 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 ST6GALNAC3Q8NDV1 305 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 LPCAT1Q8NF37 534 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 UBE2Q2Q8WVN8 375 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 ZNF501Q96CX3 271 aaPredicted RBP18.61■□□□□ 0.57
SORT1-203ENST00000471996 SGSM3Q96HU1 749 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 ILKAPQ9H0C8 392 aaPredicted RBP18.61■□□□□ 0.57
SORT1-203ENST00000471996 DTLQ9NZJ0 730 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 NTNG1Q9Y2I2 539 aa18.61■□□□□ 0.57
SORT1-203ENST00000471996 TMEM191CA6NGB0 347 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 F5H423 210 aaPredicted RBP18.6■□□□□ 0.57
SORT1-203ENST00000471996 ATP1A3P13637 1013 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 IDSP22304 550 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 FECHP22830 423 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 IL4RP24394 825 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 HNRNPH3P31942 346 aaKnown RBP18.6■□□□□ 0.57
SORT1-203ENST00000471996 SERPINB6P35237 376 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 DSC2Q02487 901 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 ATP1A4Q13733 1029 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 LYPLAL1Q5VWZ2 237 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 KLHL35Q6PF15 583 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 IGFL3Q6UXB1 125 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 ZNF547Q8IVP9 402 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.6■□□□□ 0.57
SORT1-203ENST00000471996 INPP5DQ92835 1189 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 CSPG4P5Q96PW8 444 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 CD180Q99467 661 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 SPATA16Q9BXB7 569 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 TRIM7Q9C029 511 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 RUBCNLQ9H714 662 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 PCDH9Q9HC56 1237 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 LATS2Q9NRM7 1088 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 CROCCQ5TZA2 2017 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 POLEQ07864 2286 aa18.6■□□□□ 0.57
SORT1-203ENST00000471996 UBA6A0AVT1 1052 aaPredicted RBP18.59■□□□□ 0.57
SORT1-203ENST00000471996 HEATR9A2RTY3 570 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 TLCD2A6NGC4 264 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 CAPN1P07384 714 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 CA4P22748 312 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 GPR19Q15760 415 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 KYNUQ16719 465 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
SORT1-203ENST00000471996 LRRC49Q8IUZ0 686 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 GLYATL1Q969I3 302 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 ZSCAN5AQ9BUG6 496 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 AGPAT4Q9NRZ5 378 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 TAS2R14Q9NYV8 317 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 TRIM10Q9UDY6 481 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 WDR37Q9Y2I8 494 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 PCDHGA10Q9Y5H3 936 aa18.59■□□□□ 0.57
SORT1-203ENST00000471996 PDZD2O15018 2839 aa18.58■□□□□ 0.57
SORT1-203ENST00000471996 ATMINO43313 823 aaPredicted RBP18.58■□□□□ 0.56
SORT1-203ENST00000471996 ALPPP05187 535 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 ITGA3P26006 1051 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 RORAP35398 523 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 GLRBP48167 497 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 QPCTQ16769 361 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 ZXDCQ2QGD7 858 aaPredicted RBP18.58■□□□□ 0.56
SORT1-203ENST00000471996 KRTAP21-3Q3LHN1 58 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 DPCR1Q3MIW9 517 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 PRAMEF17Q5VTA0 474 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 GPR26Q8NDV2 337 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 ARRDC2Q8TBH0 407 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 CPT1BQ92523 772 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms