RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CCDC50Q8IVM0 306 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 TMEM151BQ8IW70 566 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 IPMKQ8NFU5 416 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 OR10G6Q8NH81 332 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 CCHCR1Q8TD31 782 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 BLOC1S5Q8TDH9 187 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 TMEM159Q96B96 161 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 IQCDQ96DY2 449 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 AHCYL2Q96HN2 611 aaKnown RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 ADGRE3Q9BY15 652 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 MFRPQ9BY79 579 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 SLC40A1Q9NP59 571 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 ZNF71Q9NQZ8 489 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 FAM8A1Q9UBU6 413 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 FAM153AQ9UHL3 310 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 PCDHA13Q9Y5I0 950 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 ARL5AQ9Y689 179 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 RP1L1Q8IWN7 2480 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 IGHV5-51A0A0C4DH38 117 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 TCRBV7S2A1N4TA0A589 114 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 PDZK1P1A8MUH7 402 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ZNF487B1APH4 448 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 CAPN5O15484 640 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 CBFA2T2O43439 604 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 SUV39H1O43463 412 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 STK17BO94768 372 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 UBXN7O94888 489 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 LCA5LO95447 670 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DLGAP3O95886 979 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 C9P02748 559 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 FOLR1P15328 257 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 NFKBIAP25963 317 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ADRA1AP35348 466 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ARCN1P48444 511 aaKnown RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 CLCNKAP51800 687 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 GPLD1P80108 840 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 TMPRSS15P98073 1019 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 FOXM1Q08050 763 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 SLC1A5Q15758 541 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 RPE65Q16518 533 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 INSCQ1MX18 579 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DEFB109BQ30KR1 87 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DCAF12Q5T6F0 453 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 GPRC6AQ5T6X5 926 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DENND5AQ6IQ26 1287 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 LCN10Q6JVE6 187 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 FAM199XQ6PEV8 388 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 ABRAXAS1Q6UWZ7 409 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 RAD9BQ6WBX8 426 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 PID1Q7Z2X4 250 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DAAM2Q86T65 1068 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 SLC9B2Q86UD5 537 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 LRRTM4Q86VH4 590 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 GAS2L3Q86XJ1 694 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 RHOT2Q8IXI1 618 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 TAB3Q8N5C8 712 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 IL22RA1Q8N6P7 574 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 GALNT6Q8NCL4 622 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 OR13C4Q8NGS5 318 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 TFB1MQ8WVM0 346 aaKnown RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 ALG3Q92685 438 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 C9orf72Q96LT7 481 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ZNF830Q96NB3 372 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 QKIQ96PU8 341 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP48-207ENST00000471752 INSM2Q96T92 566 aaPredicted RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 ZSCAN5AQ9BUG6 496 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 FICDQ9BVA6 458 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 DDA1Q9BW61 102 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ZMYND15Q9H091 742 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 RBSNQ9H1K0 784 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 FBXO8Q9NRD0 319 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 ZNHIT6Q9NWK9 470 aaKnown RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 PIH1D1Q9NWS0 290 aaKnown RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 DDX56Q9NY93 547 aaKnown RBP7.93□□□□□ -1.14
USP48-207ENST00000471752 PCDHB11Q9Y5F2 797 aa7.93□□□□□ -1.14
USP48-207ENST00000471752 SPTAN1Q13813 2472 aaKnown RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 KIR2DS5A0A0G2JLQ3 304 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 A0A0G2JNG1 304 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 KIR2DS3K7RE56 304 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 PPP1R12AO14974 1030 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 KMOO15229 486 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ZRANB2O95218 330 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP48-207ENST00000471752 VIPP01282 170 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ITGB2P05107 769 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PYGLP06737 847 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PYGMP11217 842 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ZFXP17010 805 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 TPH1P17752 444 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 CA4P22748 312 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PSMB4P28070 264 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PBLDP30039 288 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 HMGCLP35914 325 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 SLC1A1P43005 524 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 NR2C2P49116 596 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 DCDC1P59894 354 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 XIAPP98170 497 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms