RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CNTFP26441 200 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 RABIFP47224 123 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 RACK1P63244 317 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 WDR45BQ5MNZ6 344 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 LGSNQ5TDP6 509 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 LYSMD4Q5XG99 296 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 FAM45BPQ6NSW5 357 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 CRTC3Q6UUV7 619 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TAOK1Q7L7X3 1001 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 C11orf74Q86VG3 221 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 ZNF547Q8IVP9 402 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 FAM45AQ8TCE6 357 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 OR1E3Q8WZA6 343 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TSACCQ96A04 125 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 KLHDC7BQ96G42 594 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SH3GL2Q99962 352 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SARS2Q9NP81 518 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TMEM74BQ9NUR3 256 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SLC17A4Q9Y2C5 497 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SDK1Q7Z5N4 2213 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TPP1O14773 563 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 PHGDHO43175 533 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 ATP8B1O43520 1251 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 NUAK1O60285 661 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 RFPL1O75677 317 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 OR56A5P0C7T3 313 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 FDXRP22570 491 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 CD38P28907 300 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 CNR2P34972 360 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 GTF2H3Q13889 308 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SIM2Q14190 667 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 LPAL2Q16609 132 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 PPM1JQ5JR12 505 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TRAPPC5Q8IUR0 188 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SIDT2Q8NBJ9 832 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 OR56A4Q8NGH8 313 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 ZC3H10Q96K80 434 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 WDR92Q96MX6 357 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 GPR21Q99679 349 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 ZCCHC2Q9C0B9 1178 aaKnown RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 SNX15Q9NRS6 342 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 TM7SF3Q9NS93 570 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 CORO1CQ9ULV4 474 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-203ENST00000471658 PCDHGA2Q9Y5H1 932 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 R4GN57 208 aa18.92■□□□□ 0.62
PSPC1-203ENST00000471658 GOLGA8RI6L899 631 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 CHUKO15111 745 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 AP2A2O94973 939 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 SLC34A2O95436 690 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 SYF2O95926 243 aaKnown RBP18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PBLDP30039 288 aaPredicted RBP18.91■□□□□ 0.62
PSPC1-203ENST00000471658 CSNK1EP49674 416 aaKnown RBP18.91■□□□□ 0.62
PSPC1-203ENST00000471658 THOP1P52888 689 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 POU4F1Q01851 419 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PLA2G4EQ3MJ16 856 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 ZNF542PQ5EBM4 170 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 TNFAIP8L3Q5GJ75 292 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 TMEM207Q6UWW9 146 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PRR23BQ6ZRT6 265 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 MFSD2AQ8NA29 543 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 GIMAP7Q8NHV1 300 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 MTBPQ96DY7 904 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PGM2Q96G03 612 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PDXPQ96GD0 296 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 C1QTNF1Q9BXJ1 281 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 GPR27Q9NS67 375 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 FAM8A1Q9UBU6 413 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 SLC23A2Q9UGH3 650 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 ZNHIT2Q9UHR6 403 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 SUFUQ9UMX1 484 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 PLEKHM1Q9Y4G2 1056 aa18.91■□□□□ 0.62
PSPC1-203ENST00000471658 BCAT2O15382 392 aaPredicted RBP18.9■□□□□ 0.62
PSPC1-203ENST00000471658 MT-ND3P03897 115 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 CREB1P16220 341 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 HTR1BP28222 390 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 CCR7P32248 378 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 PRLHRP49683 370 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 CLCN7P51798 805 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 BCL7AQ4VC05 210 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 TTMPQ5BVD1 217 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 TIFABQ6ZNK6 161 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 RD3Q7Z3Z2 195 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 C11orf96Q7Z7L8 435 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 CROCCP2Q86T23 111 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 TRABD2AQ86V40 505 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 SPATS2Q86XZ4 545 aaKnown RBP18.9■□□□□ 0.62
PSPC1-203ENST00000471658 LILRA3Q8N6C8 439 aaPredicted RBP18.9■□□□□ 0.62
PSPC1-203ENST00000471658 CYP4F12Q9HCS2 524 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 NOVA2Q9UNW9 492 aaKnown RBP18.9■□□□□ 0.62
PSPC1-203ENST00000471658 COMMD10Q9Y6G5 202 aa18.9■□□□□ 0.62
PSPC1-203ENST00000471658 SPTY2D1-AS1A0A0U1RR47 76 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 PRSS38A1L453 326 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 GOLGA6L10A6NI86 522 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 E5RI56 91 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 TLR4O00206 839 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 TOR1BO14657 336 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 GRID2O43424 1007 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 POP7O75817 140 aaKnown RBP18.89■□□□□ 0.62
PSPC1-203ENST00000471658 PYGBP11216 843 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 STMN1P16949 149 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms