RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 KPNA5O15131 536 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SNX3O60493 162 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 EDF1O60869 148 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 VPS26AO75436 327 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SERPINE1P05121 402 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PRKCGP05129 697 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PIRTP0C851 137 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 TROVE2P10155 538 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PKMP14618 531 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CPA3P15088 417 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 TIMP2P16035 220 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ZNF37AP17032 561 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 BPIP17213 487 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 BCKDHBP21953 392 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ACRV1P26436 265 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 TEAD1P28347 426 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SLC8A1P32418 973 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 NSG1P42857 185 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 MAPK9P45984 424 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 DNAJB13P59910 316 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 DPTQ07507 201 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GALNT1Q10472 559 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 LRRC14Q15048 493 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SPDYAQ5MJ70 313 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 LRRC66Q68CR7 880 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 METTL2BQ6P1Q9 378 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CNSTQ6PJW8 725 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ZYG11AQ6WRX3 759 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CDHR3Q6ZTQ4 885 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PIWIL4Q7Z3Z4 852 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 YTHDF3Q7Z739 585 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ZSWIM9Q86XI8 627 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 NUDCD3Q8IVD9 361 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SLC22A9Q8IVM8 553 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CACNA2D3Q8IZS8 1091 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CENPLQ8N0S6 344 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 NXPE1Q8N323 547 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CHCHD4Q8N4Q1 142 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 TRAM1L1Q8N609 369 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GBP7Q8N8V2 638 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GPATCH11Q8N954 259 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CHST14Q8NCH0 376 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 OR6Y1Q8NGX8 325 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 OR6K2Q8NGY2 324 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 MGARPQ8TDB4 240 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ZNF473Q8WTR7 871 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 FAM131CQ96AQ9 280 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GABRG3Q99928 467 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GTPBP2Q9BX10 602 aaKnown RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 TSSK1BQ9BXA7 367 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PITPNM3Q9BZ71 974 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 DERL2Q9GZP9 239 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CLPBQ9H078 707 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 FAM107BQ9H098 131 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 RSPH9Q9H1X1 276 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 P2RY12Q9H244 342 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 CAPN10Q9HC96 672 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GPAMQ9HCL2 828 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PCDH12Q9NPG4 1184 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 FBXO6Q9NRD1 293 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 IL1RAPL1Q9NZN1 696 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SLC17A7Q9P2U7 560 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 B4GALT6Q9UBX8 382 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 GNPTGQ9UJJ9 305 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 EMCNQ9ULC0 261 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 KCTD3Q9Y597 815 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 MUC22E2RYF6 1773 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-207ENST00000471218 EML5Q05BV3 1969 aa9.06□□□□□ -0.96
PTPRE-207ENST00000471218 PKD1L2Q7Z442 2459 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 CCDC78A2IDD5 438 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 SYCE1LA8MT33 242 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 TARM1B6A8C7 271 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 EBAG9O00559 213 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 GAPDHSO14556 408 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 TSPAN6O43657 245 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 HYAL3O43820 417 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 MAGEC1O60732 1142 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 TRIM13O60858 407 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 SNNO75324 88 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 ALPIP09923 528 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 CBSLP0DN79 551 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 RALBP11234 206 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 ENO3P13929 434 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 HOXB2P14652 356 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 C5AR1P21730 350 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 LHCGRP22888 699 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 ITPKAP23677 461 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 ATP5F1P24539 256 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 CBSP35520 551 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 SLC6A11P48066 632 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 PTSQ03393 145 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 KDSRQ06136 332 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 PDAP1Q13442 181 aaKnown RBP9.05□□□□□ -0.96
PTPRE-207ENST00000471218 STARD3Q14849 445 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 AGERQ15109 404 aa9.05□□□□□ -0.96
PTPRE-207ENST00000471218 TRIP6Q15654 476 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms