RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SSU72Q9NP77 194 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PRSS16Q9NQE7 514 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 HEBP1Q9NRV9 189 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 INTS10Q9NVR2 710 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ZSCAN32Q9NX65 697 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM53CQ9NYF3 392 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 EURLQ9NYK6 297 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PKD2L2Q9NZM6 624 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 IL17CQ9P0M4 197 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 NFKBIL1Q9UBC1 381 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ARL5AQ9Y689 179 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PIKFYVEQ9Y2I7 2098 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 LRRK1Q38SD2 2015 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TRPM6Q9BX84 2022 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PLXNA2O75051 1894 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 NEMP1O14524 444 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SLC30A4O14863 429 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CD3EAPO15446 510 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 AP1G1O43747 822 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ATG13O75143 517 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SYF2O95926 243 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 C1QAP02745 245 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PYGLP06737 847 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PIRTP0C851 137 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ERVK-10P10266 1014 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 HLA-EP13747 358 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF16P17020 682 aaPredicted RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CTPS1P17812 591 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ITGALP20701 1170 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CD72P21854 359 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PMLP29590 882 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 OAS2P29728 719 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 GKP32189 559 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 HNF1BP35680 557 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SPAM1P38567 509 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CD151P48509 253 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 LIMK2P53671 638 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SLC18A1P54219 525 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 DCDC1P59894 354 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CACNG1Q06432 222 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 MESP2Q0VG99 397 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ITGA9Q13797 1035 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TTC31Q49AM3 519 aaPredicted RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TNFAIP8L3Q5GJ75 292 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PPM1JQ5JR12 505 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TSSK4Q6SA08 328 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CES3Q6UWW8 571 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PACS1Q6VY07 963 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TIFABQ6ZNK6 161 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ERN2Q76MJ5 926 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 DPPA4Q7L190 304 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 STRA8Q7Z7C7 330 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TRABD2AQ86V40 505 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 KBTBD6Q86V97 674 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 LCA5Q86VQ0 697 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CILP2Q8IUL8 1156 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SULF2Q8IWU5 870 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 NRSN1Q8IZ57 195 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 MDGA1Q8NFP4 955 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 OR4K2Q8NGD2 314 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 OR13J1Q8NGT2 312 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 OR2T3Q8NH03 318 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ULK4Q96C45 1275 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TLCD1Q96CP7 247 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TSPAN17Q96FV3 270 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 VPS39Q96JC1 886 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 DNAJC1Q96KC8 554 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TBATAQ96M53 351 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 NSMCE3Q96MG7 304 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF778Q96MU6 729 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 RBBP8Q99708 897 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CCDC68Q9H2F9 335 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 LTB4R2Q9NPC1 389 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 PRMT8Q9NR22 394 aaPredicted RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 IARS2Q9NSE4 1012 aaKnown RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 POLR3BQ9NW08 1133 aaPredicted RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SPATA6Q9NWH7 488 aaPredicted RBP6.59□□□□□ -1.35
VAMP3-202ENST00000470357 CACNA2D2Q9NY47 1150 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 TBK1Q9UHD2 729 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 FBXO5Q9UKT4 447 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 COMMD10Q9Y6G5 202 aa6.59□□□□□ -1.35
VAMP3-202ENST00000470357 IGF2RP11717 2491 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 GLYATL1P3A0A0U1RQE8 302 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CCDC78A2IDD5 438 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NPIPB15A6NHN6 443 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CXorf49A8MYA2 514 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TRIM49D1C9J1S8 452 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 H3BQF6 201 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TSPAN6O43657 245 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms