RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 CCDC78A2IDD5 438 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 KPNA5O15131 536 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 KMOO15229 486 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 GPR39O43194 453 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 HAUS5O94927 633 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 RASGRP1O95267 797 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 WISP3O95389 354 aaPredicted RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 OR56A5P0C7T3 313 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 PRSS56P0CW18 603 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 PKMP14618 531 aaKnown RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 ZNF8P17098 575 aaPredicted RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 MSH3P20585 1137 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 MAOBP27338 520 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 ATP5DP30049 168 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 SPRP35270 261 aaPredicted RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 SLC26A3P40879 764 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 SKIV2L2P42285 1042 aaKnown RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 MAGEA12P43365 314 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 HK3P52790 923 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 SRP54P61011 504 aaKnown RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 RPA4Q13156 261 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 CTBP1Q13363 440 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 ZKSCAN8Q15776 578 aaPredicted RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 CTSL3PQ5NE16 218 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 LVRNQ6Q4G3 990 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 XKR5Q6UX68 686 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 DBX2Q6ZNG2 339 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 TIFABQ6ZNK6 161 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 TAS2R42Q7RTR8 314 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 LRRTM4Q86VH4 590 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 OR2L2Q8NH16 312 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 ANKRD7Q92527 254 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 SNX19Q92543 992 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 DCUN1D1Q96GG9 259 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 PANX3Q96QZ0 392 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 AARSD1Q9BTE6 412 aaKnown RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 BOCQ9BWV1 1114 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 CLPBQ9H078 707 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 VIPAS39Q9H9C1 493 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 FGF22Q9HCT0 170 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 AASDHPPTQ9NRN7 309 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 GULP1Q9UBP9 304 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 GNPTGQ9UJJ9 305 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 PNMA8BQ9ULN7 279 aaPredicted RBP11.11□□□□□ -0.63
MSH5-214ENST00000468602 CA5BQ9Y2D0 317 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 ANKRD6Q9Y2G4 727 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 R4GN57 208 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
MSH5-214ENST00000468602 TP53BP1Q12888 1972 aaPredicted RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 HMX2A2RU54 273 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GOLGA8KD6RF30 607 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GOLGA8TH3BQL2 631 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 ARHGAP33O14559 1287 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 INPP4BO15327 924 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GRID2O43424 1007 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 OR1I1O60431 355 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GPC4O75487 556 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 LMNAP02545 664 aaKnown RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 FTH1P02794 183 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 MPLP40238 635 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 CSNK1EP49674 416 aaKnown RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 CTSCP53634 463 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 HNRNPKP61978 463 aaKnown RBP eCLIP11.1□□□□□ -0.63
MSH5-214ENST00000468602 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.63
MSH5-214ENST00000468602 POU4F1Q01851 419 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 PPARDQ03181 441 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 ALG11Q2TAA5 492 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 ZNF789Q5FWF6 425 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 TNFAIP8L3Q5GJ75 292 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 AGAP9Q5VTM2 703 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 FAM45BPQ6NSW5 357 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 ZNF549Q6P9A3 640 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 KANSL1Q7Z3B3 1105 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 STRA8Q7Z7C7 330 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 RASGRP3Q8IV61 690 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 FSTL5Q8N475 847 aaPredicted RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 DEFB119Q8N690 84 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 FAM45AQ8TCE6 357 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 DCAKDQ8WVC6 231 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 OR1E3Q8WZA6 343 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 MTBPQ96DY7 904 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 PDLIM5Q96HC4 596 aaKnown RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 VPS39Q96JC1 886 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 ELF4Q99607 663 aaPredicted RBP11.1□□□□□ -0.63
MSH5-214ENST00000468602 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 OR2AG1Q9H205 316 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 DPEP2Q9H4A9 486 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 IL1RAPL1Q9NZN1 696 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 KLQ9UEF7 1012 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 LGALS13Q9UHV8 139 aa11.1□□□□□ -0.63
MSH5-214ENST00000468602 PCDHGB2Q9Y5G2 931 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms