RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TCN2P20062 427 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 CD68P34810 354 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 TMEM115Q12893 351 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 GPR18Q14330 331 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 ABRAXAS1Q6UWZ7 409 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 C11orf96Q7Z7L8 435 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 SLC25A41Q8N5S1 370 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 C9orf43Q8TAL5 461 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 TFB1MQ8WVM0 346 aaKnown RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 ELMO2Q96JJ3 720 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 ANP32EQ9BTT0 268 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 ZNF768Q9H5H4 540 aaKnown RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 SLC40A1Q9NP59 571 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 ZNF71Q9NQZ8 489 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-207ENST00000467819 FAM153AQ9UHL3 310 aa20.7■□□□□ 0.9
COL9A3-207ENST00000467819 KIF1CO43896 1103 aaKnown RBP20.69■□□□□ 0.9
COL9A3-207ENST00000467819 CST8O60676 142 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 MFAP3LO75121 409 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 VCLP18206 1134 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 COMTP21964 271 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 F8A1P23610 371 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 CDKN2BP42772 138 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 SLC1A1P43005 524 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 CHRNA4P43681 627 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 CAPZBP47756 277 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 WNT3AP56704 352 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 MC1RQ01726 317 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 WASHC5Q12768 1159 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 MAP7Q14244 749 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 AGAP9Q5VTM2 703 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 CACHD1Q5VU97 1274 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 IRGCQ6NXR0 463 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 FAM92BQ6ZTR7 304 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 RASGRP3Q8IV61 690 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 VSTM4Q8IW00 320 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 GALNT6Q8NCL4 622 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 TTC25Q96NG3 672 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 EPN3Q9H201 632 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 WDR37Q9Y2I8 494 aa20.69■□□□□ 0.9
COL9A3-207ENST00000467819 COL12A1Q99715 3063 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 TOX3O15405 576 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 GPR39O43194 453 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 KIAA0754O94854 1291 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 HMGCLP35914 325 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 DLSTP36957 453 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 TNNT3P45378 269 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 NR2C2P49116 596 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 TFDP2Q14188 446 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 SIRPB2Q5JXA9 342 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 KDELC1Q6UW63 502 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 C6orf15Q6UXA7 325 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 FAM151BQ6UXP7 276 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 WASH2PQ6VEQ5 465 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 BZW1Q7L1Q6 419 aaKnown RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 TTC30BQ8N4P2 665 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 APOBEC4Q8WW27 367 aaKnown RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 IL26Q9NPH9 171 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 WASH6PQ9NQA3 447 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 KLHL8Q9P2G9 620 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-207ENST00000467819 CROTQ9UKG9 612 aa20.68■□□□□ 0.9
COL9A3-207ENST00000467819 LOC285095A0A1B0GVY8 99 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A9O60656 530 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 NDUFA10O95299 355 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A6P19224 532 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A1P22309 533 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A4P22310 534 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 SPAM1P38567 509 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 HALP42357 657 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 CHRNA6Q15825 494 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 SPOCD1Q6ZMY3 1216 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 PRSS42Q7Z5A4 293 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 ZC3H18Q86VM9 953 aaKnown RBP20.67■□□□□ 0.9
COL9A3-207ENST00000467819 RBM12BQ8IXT5 1001 aaKnown RBP20.67■□□□□ 0.9
COL9A3-207ENST00000467819 BLOC1S5Q8TDH9 187 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 HAUS1Q96CS2 278 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 STAMBPL1Q96FJ0 436 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 ZDHHC12Q96GR4 267 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 TRABDQ9H4I3 376 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A7Q9HAW7 530 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A10Q9HAW8 530 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 UGT1A8Q9HAW9 530 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 LNPEPQ9UIQ6 1025 aa20.67■□□□□ 0.9
COL9A3-207ENST00000467819 BUD23O43709 281 aaKnown RBP20.66■□□□□ 0.9
COL9A3-207ENST00000467819 PPP1CAP62136 330 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 ADCY2Q08462 1091 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 IL11RAQ14626 422 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 PPP2R5EQ16537 467 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 TAZQ16635 292 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 GLT6D1Q7Z4J2 308 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 IPMKQ8NFU5 416 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 GPR150Q8NGU9 434 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 BRSK1Q8TDC3 778 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 ABHD17AQ96GS6 310 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 OXNAD1Q96HP4 312 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-207ENST00000467819 MRGPRX2Q96LB1 330 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 ZCCHC2Q9C0B9 1178 aaKnown RBP20.66■□□□□ 0.9
COL9A3-207ENST00000467819 GOLPH3Q9H4A6 298 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 IL17CQ9P0M4 197 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 PSMD13Q9UNM6 376 aa20.66■□□□□ 0.9
COL9A3-207ENST00000467819 PCDHB3Q9Y5E6 796 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms