RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
UBR4-211ENST00000467272 PDE7BQ9NP56 450 aa11.96□□□□□ -0.49
UBR4-211ENST00000467272 CACNA1DQ01668 2161 aa11.96□□□□□ -0.5
UBR4-211ENST00000467272 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 SSU72P8A0A1W2PR75 194 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 A1L4Q6 167 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 VEGFDO43915 354 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 RASSF9O75901 435 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 SLC25A14O95258 325 aaPredicted RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 CBX6O95503 412 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 AMD1P17707 334 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 FECHP22830 423 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 DMPKQ09013 629 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 TUBB3Q13509 450 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 DPYSL3Q14195 570 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 PIGHQ14442 188 aaPredicted RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 IFI16Q16666 785 aaKnown RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 CCDC183Q5T5S1 534 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 LCN10Q6JVE6 187 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 CYB5D1Q6P9G0 228 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 LRRTM4Q86VH4 590 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 HPS6Q86YV9 775 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 PQLC3Q8N755 202 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 PNPLA2Q96AD5 504 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 ZNF653Q96CK0 615 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 ZNF501Q96CX3 271 aaPredicted RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 SMAD5Q99717 465 aaKnown RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 MLPHQ9BV36 600 aaPredicted RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 NUDT9Q9BW91 350 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 MRPL47Q9HD33 250 aaKnown RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 RARRES3Q9UL19 164 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 FARSAQ9Y285 508 aaKnown RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
UBR4-211ENST00000467272 ZFHX3Q15911 3703 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
UBR4-211ENST00000467272 RAB40ALP0C0E4 278 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 EBLN1P0CF75 366 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 CA4P22748 312 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 RPL10P27635 214 aaKnown RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 RORAP35398 523 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 PTGIRP43119 386 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 ITGA1P56199 1179 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 TUBB4BP68371 445 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 IFI35P80217 286 aaPredicted RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 MYL5Q02045 173 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ITKQ08881 620 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 GPS2Q13227 327 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 TUBB2AQ13885 445 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 CHRNA6Q15825 494 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 SLC6A19Q695T7 634 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 TIGD7Q6NT04 549 aaPredicted RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 CRTC3Q6UUV7 619 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 FDCSPQ8NFU4 85 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 GPR150Q8NGU9 434 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 CCHCR1Q8TD31 782 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ZNF514Q96K75 400 aaPredicted RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
UBR4-211ENST00000467272 VPS35Q96QK1 796 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 TUBB2BQ9BVA1 445 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 OSGEPL1Q9H4B0 414 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ZFYVE1Q9HBF4 777 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 MAGEE1Q9HCI5 957 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 LATS2Q9NRM7 1088 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 FGF21Q9NSA1 209 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 IGSF5Q9NSI5 407 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ZNF451Q9Y4E5 1061 aa11.94□□□□□ -0.5
UBR4-211ENST00000467272 ARGFXA6NJG6 315 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 CPNE3O75131 537 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 MTA2O94776 668 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 BPIP17213 487 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 POU3F2P20265 443 aaPredicted RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 IDSP22304 550 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 CD86P42081 329 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 CCL11P51671 97 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 HSD11B2P80365 405 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 ACY1Q03154 408 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 GBE1Q04446 702 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 SEPT7Q16181 437 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 INSCQ1MX18 579 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 ATP13A4Q4VNC1 1196 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 TDRD12Q587J7 1177 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 ZNF789Q5FWF6 425 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 PLEKHS1Q5SXH7 462 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 C1QL3Q5VWW1 255 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 HGSNATQ68CP4 663 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 IRGCQ6NXR0 463 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 CLEC17AQ6ZS10 378 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 TRIM48Q8IWZ4 208 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 CARFQ8N187 725 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBR4-211ENST00000467272 SIDT2Q8NBJ9 832 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms