RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 CLCA2Q9UQC9 943 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 PPIL1Q9Y3C6 166 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 TCAF1Q9Y4C2 921 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 PCDHB1Q9Y5F3 818 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 U3KQA8 63 aa6.55□□□□□ -1.36
UBXN4-205ENST00000467065 ZNF106Q9H2Y7 1883 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 A0A087WUV0 522 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 FAM237BA0A1B0GVD1 139 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ESYT3A0FGR9 886 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CPED1A4D0V7 1026 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 E5RI56 91 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 H3BMM5 538 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KPNA5O15131 536 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CASC3O15234 703 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CD3EAPO15446 510 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TLX3O43711 291 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KDM1AO60341 852 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 FZD6O60353 706 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 AVILO75366 819 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 USP1O94782 785 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 VAPBO95292 243 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 MT-CO3P00414 261 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 MMP2P08253 660 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 OR56A5P0C7T3 313 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CDK4P11802 303 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CKMT1AP12532 417 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 GM2AP17900 193 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ADRA1AP35348 466 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ELK3P41970 407 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 MSH2P43246 934 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 MAGEA6P43360 314 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CHRNA4P43681 627 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SPINT3P49223 89 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PPM1FP49593 454 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PMS2P54278 862 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 YPEL5P62699 121 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PPARDQ03181 441 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KRT33BQ14525 404 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 INPP5AQ14642 412 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 NFATC4Q14934 902 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 COL28A1Q2UY09 1125 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KLHL38Q2WGJ6 581 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 HP1BP3Q5SSJ5 553 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TSTD2Q5T7W7 516 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ALS2CLQ60I27 953 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KCTD16Q68DU8 428 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 KCTD11Q693B1 232 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PTRHD1Q6GMV3 140 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 UGT3A1Q6NUS8 523 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 NEPROQ6NW34 567 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TTC23LQ6PF05 361 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 LIPIQ6XZB0 460 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 EFL1Q7Z2Z2 1120 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 RD3Q7Z3Z2 195 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SNX20Q7Z614 316 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 NLRP8Q86W28 1048 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PHYKPLQ8IUZ5 450 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 HID1Q8IV36 788 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PELI3Q8N2H9 469 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TRAM1L1Q8N609 369 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 FAM181AQ8N9Y4 354 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 GLIS1Q8NBF1 620 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 FBXO36Q8NEA4 188 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 FBXO25Q8TCJ0 367 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 HNRNPLLQ8WVV9 542 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 HDAC10Q969S8 669 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TSACCQ96A04 125 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PDXPQ96GD0 296 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CRELD1Q96HD1 420 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 HIC2Q96JB3 615 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 ZNF514Q96K75 400 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 LYSMD1Q96S90 227 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 TCF12Q99081 682 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CYTH2Q99418 400 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 COPS8Q99627 209 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PARD6BQ9BYG5 372 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SLC13A1Q9BZW2 595 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CLPBQ9H078 707 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 STMN4Q9H169 189 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 WDR26Q9H7D7 661 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PPCSQ9HAB8 311 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 MRM3Q9HC36 420 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 BPIFA1Q9NP55 256 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 CATSPERZQ9NTU4 200 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 NLE1Q9NVX2 485 aaPredicted RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
UBXN4-205ENST00000467065 GMPR2Q9P2T1 348 aaKnown RBP6.54□□□□□ -1.36
UBXN4-205ENST00000467065 SPASTQ9UBP0 616 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms