RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PSMD10O75832 226 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZWINTO95229 277 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 CLDN14O95500 239 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 BCL10O95999 233 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 FYNP06241 537 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 LINGO3P0C6S8 592 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 PFKFB1P16118 471 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 S1PR1P21453 382 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 CPT2P23786 658 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 NMBRP28336 390 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF41P51814 821 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 CSE1LP55060 971 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 EEF1A1P68104 462 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 TFCP2Q12800 502 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 IL11RAQ14626 422 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 MELKQ14680 651 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 EEF1A1P5Q5VTE0 462 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF549Q6P9A3 640 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF704Q6ZNC4 412 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 SLFN11Q7Z7L1 901 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 VSIG1Q86XK7 387 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 GALNT13Q8IUC8 556 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 MAP7D3Q8IWC1 876 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 MAML2Q8IZL2 1156 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 FBXL14Q8N1E6 418 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 OR5R1Q8NH85 324 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 TBC1D16Q8TBP0 767 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 PIGTQ969N2 578 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 SPATA17Q96L03 361 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF385AQ96PM9 386 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 SH3GLB2Q9NR46 395 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 OLAHQ9NV23 265 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 SIX4Q9UIU6 781 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 TUBE1Q9UJT0 475 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 PADI3Q9ULW8 664 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 AMDHD2Q9Y303 409 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 NME7Q9Y5B8 376 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 TTC3P53804 2025 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 C15orf62A8K5M9 175 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ANKRD66B4E2M5 251 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM189-UBE2V1I3L0A0 370 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 MID1O15344 667 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 SSX4O60224 188 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 TSPAN1O60635 241 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 CREG1O75629 220 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 CAMTA2O94983 1202 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 DAOP14920 347 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 RAB28P51157 221 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 DDR1Q08345 913 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 NFATC4Q14934 902 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ARMC3Q5W041 872 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 RHBDF2Q6PJF5 856 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 FAM198BQ6UWH4 519 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 RBPMS2Q6ZRY4 209 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ATG9AQ7Z3C6 839 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ADHFE1Q8IWW8 467 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 XXYLT1Q8NBI6 393 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 RBM15BQ8NDT2 890 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ACVR1CQ8NER5 493 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 HMGCLL1Q8TB92 370 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 PPP4R1Q8TF05 950 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ATL1Q8WXF7 558 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ABTB1Q969K4 478 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 VPS33AQ96AX1 596 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 HDAC11Q96DB2 347 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ERLEC1Q96DZ1 483 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 CDCA5Q96FF9 252 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF830Q96NB3 372 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 RAB3IPQ96QF0 476 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 CSF3RQ99062 836 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 NOL11Q9H8H0 719 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ANKZF1Q9H8Y5 726 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 TCP11L1Q9NUJ3 509 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF224Q9NZL3 707 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 YIPF1Q9Y548 306 aa4.26□□□□□ -1.73
CDC42BPA-211ENST00000466538 PDS5AQ29RF7 1337 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 EDDM13A0A1B0GTR0 161 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 OR2M5A3KFT3 312 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TSPY2A6NKD2 308 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TO15178 435 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TRUB2O95900 331 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 BMP15O95972 392 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TSPY3P0CV98 308 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TSPY8P0CW00 308 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 FCGR1AP12314 374 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF12P17014 697 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 ERCC2P18074 760 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 CORO1AP31146 461 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMPOP42166 694 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TUBA1BP68363 451 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 CDK3Q00526 305 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TSPY1Q01534 308 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms