RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 C11orf96Q7Z7L8 435 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 MAP7D3Q8IWC1 876 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 KCTD6Q8NC69 237 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 THAP4Q8WY91 577 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 CXorf40BQ96DE9 158 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 ZNF830Q96NB3 372 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 VPS35Q96QK1 796 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TRIM55Q9BYV6 548 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 RARRES3Q9UL19 164 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 ZNF711Q9Y462 761 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TNRC6AQ8NDV7 1962 aaKnown RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TTLL8A6PVC2 850 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 SORBS2O94875 1100 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 AGFG2O95081 481 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 VCLP18206 1134 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 RPL10P27635 214 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 SSR1P43307 286 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 KHDC1Q4VXA5 237 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 PWWP2BQ6NUJ5 590 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 SYVN1Q86TM6 617 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 KMT5CQ86Y97 462 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 CCNYQ8ND76 341 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 CPT1CQ8TCG5 803 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 LRRN4Q8WUT4 740 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 TADA1Q96BN2 335 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 IMP4Q96G21 291 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 XPO4Q9C0E2 1151 aaKnown RBP16.96■□□□□ 0.31
HMGN1-210ENST00000464078 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
HMGN1-210ENST00000464078 MED13Q9UHV7 2174 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 A0A1W2PQJ5 194 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 PROSCO94903 275 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 CDK14O94921 469 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 BPIP17213 487 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 GNLYP22749 145 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 FECHP22830 423 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 GJC1P36383 396 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 PGDP52209 483 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 DRG2P55039 364 aaKnown RBP16.95■□□□□ 0.3
HMGN1-210ENST00000464078 DMPKQ09013 629 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 FHL5Q5TD97 284 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 KLHL35Q6PF15 583 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 SIDT2Q8NBJ9 832 aaKnown RBP16.95■□□□□ 0.3
HMGN1-210ENST00000464078 SSC4DQ8WTU2 575 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 CUEDC1Q9NWM3 386 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-210ENST00000464078 TMPRSS11EQ9UL52 423 aa16.95■□□□□ 0.3
HMGN1-210ENST00000464078 A0A087X0T9 212 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 IGHV5-51A0A0C4DH38 117 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 ZNF487B1APH4 448 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 KCNJ13O60928 360 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 MTX2O75431 263 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 SERPING1P05155 500 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 PIRTP0C851 137 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 FAM228BP0C875 321 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 FOLR1P15328 257 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 PTPN4P29074 926 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 HALP42357 657 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 PPP1CAP62136 330 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 ACY1Q03154 408 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 ANO6Q4KMQ2 910 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 CPZQ66K79 652 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 ZNF517Q6ZMY9 492 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-210ENST00000464078 CPNE8Q86YQ8 564 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 TRAPPC5Q8IUR0 188 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 PLD5Q8N7P1 536 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 DTX3LQ8TDB6 740 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 ZNF514Q96K75 400 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-210ENST00000464078 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-210ENST00000464078 SRPK1Q96SB4 655 aaKnown RBP16.94■□□□□ 0.3
HMGN1-210ENST00000464078 CD180Q99467 661 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 GPR63Q9BZJ6 419 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 SLC25A51Q9H1U9 297 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 FGF21Q9NSA1 209 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 WDR37Q9Y2I8 494 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 MAP4K5Q9Y4K4 846 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 CELSR2Q9HCU4 2923 aa16.94■□□□□ 0.3
HMGN1-210ENST00000464078 TLCD2A6NGC4 264 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 CPNE3O75131 537 aaKnown RBP16.93■□□□□ 0.3
HMGN1-210ENST00000464078 SLC4A1P02730 911 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 TAS2R40P59535 323 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 CDK18Q07002 472 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 IL10RAQ13651 578 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 NR1I3Q14994 352 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 ALKBH5Q6P6C2 394 aaKnown RBP16.93■□□□□ 0.3
HMGN1-210ENST00000464078 NT5DC3Q86UY8 548 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 VSIG1Q86XK7 387 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 GPR150Q8NGU9 434 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 RNF157Q96PX1 679 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 RUFY1Q96T51 708 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 SLC25A23Q9BV35 468 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 NENFQ9UMX5 172 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
HMGN1-210ENST00000464078 CRYBG3Q68DQ2 2970 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 SMTNL1A8MU46 457 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 CEACAM4O75871 244 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 NDST3O95803 873 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 EBLN1P0CF75 366 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms