RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CASP14P31944 242 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 CA5AP35218 305 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 SERPINB6P35237 376 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 ZBTB17Q13105 803 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 PAFAH1B3Q15102 231 aaKnown RBP15.4■□□□□ 0.06
SND1-203ENST00000463020 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.4■□□□□ 0.06
SND1-203ENST00000463020 LCN10Q6JVE6 187 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 IRGCQ6NXR0 463 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 C11orf96Q7Z7L8 435 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 PQLC3Q8N755 202 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 CNTD1Q8N815 330 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 TRIB3Q96RU7 358 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 SPATA16Q9BXB7 569 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 CEP41Q9BYV8 373 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 THAP2Q9H0W7 228 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 ISCUQ9H1K1 167 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 PKD2L2Q9NZM6 624 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 PADI1Q9ULC6 663 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 SHOC2Q9UQ13 582 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 HIVEP3Q5T1R4 2406 aa15.4■□□□□ 0.06
SND1-203ENST00000463020 ARGFXA6NJG6 315 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 PDZK1P1A8MUH7 402 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 TCP11X1B4DZS4 312 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 ANKRD66B4E2M5 251 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 TOX3O15405 576 aaPredicted RBP15.39■□□□□ 0.05
SND1-203ENST00000463020 SLC25A14O95258 325 aaPredicted RBP15.39■□□□□ 0.05
SND1-203ENST00000463020 CLDN1O95832 211 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 EBLN1P0CF75 366 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 GJC1P36383 396 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 PRKCIP41743 596 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 KRT81Q14533 505 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 UGT8Q16880 541 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 INSCQ1MX18 579 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 EIF2S3LQ2VIR3 472 aaKnown RBP15.39■□□□□ 0.05
SND1-203ENST00000463020 ANKRD20A8PQ5CZ79 823 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 PRAMEF17Q5VTA0 474 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 PPP1R3BQ86XI6 285 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 TRIM48Q8IWZ4 208 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 NIPA2Q8N8Q9 360 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 SLC38A9Q8NBW4 561 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 TRIM39Q9HCM9 518 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 AIPL1Q9NZN9 384 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 KCND3Q9UK17 655 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
SND1-203ENST00000463020 KCNK1O00180 336 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 AURKAO14965 403 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 DDX3YO15523 660 aaKnown RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 GPR39O43194 453 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 TPM1P09493 284 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 CCDC172P0C7W6 258 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 CCL11P51671 97 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 TUBB3Q13509 450 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 PPP1R2P3Q6NXS1 205 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 ABRAXAS1Q6UWZ7 409 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 RAVER1Q8IY67 606 aaKnown RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 EFCAB3Q8N7B9 438 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 GLYATL1Q969I3 302 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 TCTN2Q96GX1 697 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 SLC41A2Q96JW4 573 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 PPM1MQ96MI6 270 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 TSGA13Q96PP4 275 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 MLPHQ9BV36 600 aaPredicted RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 NUP85Q9BW27 656 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 MFRPQ9BY79 579 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 ANAPC7Q9UJX3 599 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 DNPEPQ9ULA0 475 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 RPL26L1Q9UNX3 145 aaKnown RBP15.38■□□□□ 0.05
SND1-203ENST00000463020 SPO11Q9Y5K1 396 aa15.38■□□□□ 0.05
SND1-203ENST00000463020 A0A1B0GTH6 734 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 MTA2O94776 668 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 JCHAINP01591 159 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 CCNYL3P0C7X3 344 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 BPIP17213 487 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 CCNCP24863 283 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 PTPN4P29074 926 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 PTGIRP43119 386 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 NOP2P46087 812 aaKnown RBP15.37■□□□□ 0.05
SND1-203ENST00000463020 PGDP52209 483 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 TAS2R40P59535 323 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 KLHL30Q0D2K2 578 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 GPS2Q13227 327 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 PIGHQ14442 188 aaPredicted RBP15.37■□□□□ 0.05
SND1-203ENST00000463020 NR1I3Q14994 352 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 INPP5JQ15735 1006 aaPredicted RBP15.37■□□□□ 0.05
SND1-203ENST00000463020 HGSNATQ68CP4 663 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 FBXO38Q6PIJ6 1188 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 FAM83HQ6ZRV2 1179 aaPredicted RBP15.37■□□□□ 0.05
SND1-203ENST00000463020 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 LRRTM4Q86VH4 590 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 NAT14Q8WUY8 206 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 C19orf60Q96EN9 201 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 MAP3K3Q99759 626 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 TIMM29Q9BSF4 260 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 SLC25A23Q9BV35 468 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
SND1-203ENST00000463020 CASS4Q9NQ75 786 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms