RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 POLHQ9Y253 713 aa15.13■□□□□ 0.01
SKA3-204ENST00000462482 SLC30A1Q9Y6M5 507 aa15.13■□□□□ 0.01
SKA3-204ENST00000462482 OR52A4PA6NMU1 304 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 MTSS1O43312 755 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 SPOPO43791 374 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 MT-CYBP00156 380 aaPredicted RBP15.12■□□□□ 0.01
SKA3-204ENST00000462482 SLC1A1P43005 524 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 LEPRP48357 1165 aaKnown RBP15.12■□□□□ 0.01
SKA3-204ENST00000462482 NR2C2P49116 596 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 DRG2P55039 364 aaKnown RBP15.12■□□□□ 0.01
SKA3-204ENST00000462482 TMEM115Q12893 351 aaPredicted RBP15.12■□□□□ 0.01
SKA3-204ENST00000462482 GPR18Q14330 331 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 COLEC12Q5KU26 742 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 FAM92BQ6ZTR7 304 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 AMZ2Q86W34 360 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 TFB1MQ8WVM0 346 aaKnown RBP15.12■□□□□ 0.01
SKA3-204ENST00000462482 TEKT5Q96M29 485 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 OLFM3Q96PB7 478 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 BPIFA1Q9NP55 256 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 SLC40A1Q9NP59 571 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 UBP1Q9NZI7 540 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 HACD3Q9P035 362 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 EPHA6Q9UF33 1036 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 PADI1Q9ULC6 663 aa15.12■□□□□ 0.01
SKA3-204ENST00000462482 SPAG6O75602 509 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 HMGCLP35914 325 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 SH3BP2P78314 561 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 KLRB1Q12918 225 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 ERV3-1Q14264 604 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 PLCL1Q15111 1095 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 PPP2R5EQ16537 467 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.11■□□□□ 0.01
SKA3-204ENST00000462482 ATP13A5Q4VNC0 1218 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 LDLRAP1Q5SW96 308 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 ATP1A1-AS1Q5TC04 95 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 TEX19Q8NA77 164 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 SIDT2Q8NBJ9 832 aaKnown RBP15.11■□□□□ 0.01
SKA3-204ENST00000462482 UBXN4Q92575 508 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 RSC1A1Q92681 617 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 TADA1Q96BN2 335 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
SKA3-204ENST00000462482 RARRES3Q9UL19 164 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 PKP3Q9Y446 797 aa15.11■□□□□ 0.01
SKA3-204ENST00000462482 MRPS18BQ9Y676 258 aaKnown RBP15.11■□□□□ 0.01
SKA3-204ENST00000462482 PIPSLA2A3N6 862 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 PRR19A6NJB7 356 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 C3orf70A6NLC5 250 aaPredicted RBP15.1■□□□□ 0.01
SKA3-204ENST00000462482 FGF5P12034 268 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 BRAFP15056 766 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 ZNF28P17035 718 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 NELFEP18615 380 aaKnown RBP15.1■□□□□ 0.01
SKA3-204ENST00000462482 PTPN3P26045 913 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 SPAM1P38567 509 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 WNT3AP56704 352 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 FOXK1P85037 733 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 TUBB3Q13509 450 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 ITGA9Q13797 1035 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
SKA3-204ENST00000462482 BPHLQ86WA6 291 aaPredicted RBP15.1■□□□□ 0.01
SKA3-204ENST00000462482 ATCAYQ86WG3 371 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 ZNF547Q8IVP9 402 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 KLHL6Q8WZ60 621 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 TWSG1Q9GZX9 223 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 RAB33BQ9H082 229 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 SPO11Q9Y5K1 396 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 KCNMB2Q9Y691 235 aa15.1■□□□□ 0.01
SKA3-204ENST00000462482 ARHGEF17Q96PE2 2063 aaPredicted RBP15.1■□□□□ 0.01
SKA3-204ENST00000462482 SDK2Q58EX2 2172 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 TLN1Q9Y490 2541 aaKnown RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 GLYATL1P3A0A0U1RQE8 302 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 CDC14CA4D256 554 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 AURKAO14965 403 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 KIF1CO43896 1103 aaKnown RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 RFPL1O75677 317 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 POP7O75817 140 aaKnown RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 EPOP01588 193 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 PTMSP20962 102 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 PDE1BQ01064 536 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 ACY1Q03154 408 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 DNASE1L3Q13609 305 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 UBAP2LQ14157 1087 aaKnown RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 LONRF2Q1L5Z9 754 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 ARMC6Q6NXE6 501 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 MFSD7Q6UXD7 560 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 GLT6D1Q7Z4J2 308 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 SLC25A41Q8N5S1 370 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 DTX3LQ8TDB6 740 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 BLOC1S5Q8TDH9 187 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 P3H4Q92791 437 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 RNF31Q96EP0 1072 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 ZNF514Q96K75 400 aaPredicted RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 FCRL4Q96PJ5 515 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 VAT1Q99536 393 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 FERMT1Q9BQL6 677 aa15.09■□□□□ 0.01
SKA3-204ENST00000462482 NHEJ1Q9H9Q4 299 aaPredicted RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 IL26Q9NPH9 171 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms