RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 GRAMD2BQ96HH9 432 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF385AQ96PM9 386 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SEPHS2Q99611 448 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 EGFL8Q99944 293 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SEMA3CQ99985 751 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ADPGKQ9BRR6 497 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 HGH1Q9BTY7 390 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SPRY4Q9C004 299 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SEBOXQ9HB31 216 aaPredicted RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 C1RLQ9NZP8 487 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 RCC2Q9P258 522 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PTGDR2Q9Y5Y4 395 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 NFS1Q9Y697 457 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 CKAP5Q14008 2032 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 EDDM13A0A1B0GTR0 161 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 hDV102S1A0JD36 115 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SSX4O60224 188 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF217O75362 1048 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 TRUB2O95900 331 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CTNNA1P35221 906 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PCGF2P35227 344 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PPP5CP53041 499 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 EEF1A1P68104 462 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 ABATP80404 500 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 RBP5P82980 135 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CDK3Q00526 305 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CRYZQ08257 329 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 BFSP1Q12934 665 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 HSPB3Q12988 150 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SCARB2Q14108 478 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PTPRCAPQ14761 206 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 TNIP1Q15025 636 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 DLG2Q15700 870 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 ODF3L2Q3SX64 289 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 LEXMQ3ZCV2 418 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 XKR9Q5GH70 373 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 EEF1A1P5Q5VTE0 462 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 C18orf63Q68DL7 685 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 IL27RAQ6UWB1 636 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CLEC17AQ6ZS10 378 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PLPPR4Q7Z2D5 763 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 IRF2BP2Q7Z5L9 587 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 AACSQ86V21 672 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 FJX1Q86VR8 437 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 IQCHQ86VS3 1027 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 METTL23Q86XA0 190 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SLC5A8Q8N695 610 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 KCNH5Q8NCM2 988 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CFAP61Q8NHU2 1237 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 BBS10Q8TAM1 723 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 UTP15Q8TED0 518 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 WASF1Q92558 559 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PIGTQ969N2 578 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SPACA9Q96E40 222 aaPredicted RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 GBP5Q96PP8 586 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 CDRT15Q96T59 188 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 MRPL44Q9H9J2 332 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SMARCAL1Q9NZC9 954 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF224Q9NZL3 707 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 SIX4Q9UIU6 781 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 TUBE1Q9UJT0 475 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PCDHA7Q9UN72 937 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 KLHL20Q9Y2M5 609 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 PCDHGA5Q9Y5G8 931 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 INSL5Q9Y5Q6 135 aa2.98□□□□□ -1.93
HDAC6-212ENST00000461608 ASTN2O75129 1339 aaPredicted RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF521Q96K83 1311 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 IGLV5-37A0A075B6J1 123 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 A0A1B0GVT2 93 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 LINC01553A4QN01 128 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 LILRA5A6NI73 299 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 ZBTB43O43298 467 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 CRYABP02511 175 aaKnown RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 FDPSP14324 419 aaKnown RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 PFKFB1P16118 471 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 POLR2CP19387 275 aaPredicted RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 PTAFRP25105 342 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 ITGB8P26012 769 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 KRT2P35908 639 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 TMPOP42166 694 aaKnown RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 MTHFRP42898 656 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 RFX5P48382 616 aaPredicted RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 CLDN20P56880 219 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 SEC61A1P61619 476 aaKnown RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 PLIN5Q00G26 463 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 PDE1BQ01064 536 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 RALGDSQ12967 914 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 DHX34Q14147 1143 aaKnown RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 RAB6CQ53S08 254 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 KRT39Q6A163 491 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 TMEM211Q6ICI0 200 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 WDR73Q6P4I2 378 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 DENND5BQ6ZUT9 1274 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF534Q76KX8 674 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 CENPVQ7Z7K6 275 aaPredicted RBP2.97□□□□□ -1.93
HDAC6-212ENST00000461608 ADIPOR2Q86V24 386 aa2.97□□□□□ -1.93
HDAC6-212ENST00000461608 TMEM173Q86WV6 379 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms