RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SGSHP51688 502 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 MAPK10P53779 464 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CYP4F8P98187 520 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CREB5Q02930 508 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 TLE2Q04725 743 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 NFYCQ13952 458 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 SEMA3AQ14563 771 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 TRIM71Q2Q1W2 868 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 GPR107Q5VW38 600 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 VPS33AQ96AX1 596 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 FEM1CQ96JP0 617 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CASD1Q96PB1 797 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CGREF1Q99674 301 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 POLR3BQ9NW08 1133 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 A0A1B0GVM2 712 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 TCAF2A6NFQ2 919 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 SYNCRIPO60506 623 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 PKMP14618 531 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 GSSP48637 474 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 KCNK10P57789 538 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 IHHQ14623 411 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ADGRF1Q5T601 910 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ARMC12Q5T9G4 340 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 BEND5Q7L4P6 421 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 RAVER1Q8IY67 606 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 SLC25A23Q9BV35 468 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 SMG9Q9H0W8 520 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 NDUFAF1Q9Y375 327 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CPQQ9Y646 472 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 LRRC37A2A6NM11 1700 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 KLKB1P03952 638 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 CLCQ05315 142 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ARHGEF7Q14155 803 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 NR6A1Q15406 480 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 OR4D1Q15615 310 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 IMPG1Q17R60 797 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 PSAPL1Q6NUJ1 521 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 PGAM4Q8N0Y7 254 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ST13P5Q8NFI4 369 aaPredicted RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 EEF1AKMT1Q8WVE0 214 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
LMNB1-203ENST00000460265 SEPHS2Q99611 448 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 PKP2Q99959 881 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 MARCH5Q9NX47 278 aa15.26■□□□□ 0.03
LMNB1-203ENST00000460265 ANKRD66B4E2M5 251 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 TCEA1P23193 301 aaKnown RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 MAGEA12P43365 314 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 FOXA1P55317 472 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 SH3BP2P78314 561 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 FRG1Q14331 258 aaKnown RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 IL27RAQ6UWB1 636 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 DET1Q7L5Y6 550 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF786Q8N393 782 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 GPR78Q96P69 363 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 RANBP9Q96S59 729 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 EIF2B4Q9UI10 523 aaKnown RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 NUP214P35658 2090 aaPredicted RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 FAM149AA5PLN7 773 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 STC2O76061 302 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 SEC24AO95486 1093 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 MMP2P08253 660 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 JAK1P23458 1154 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 AKT1P31749 480 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 TRAF2Q12933 501 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 KCNJ8Q15842 424 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 AFTPHQ6ULP2 937 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 GPR180Q86V85 440 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 HERC6Q8IVU3 1022 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 MIER2Q8N344 545 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 PALMDQ9NP74 551 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 CROCCQ5TZA2 2017 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 SYCE1LA8MT33 242 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 INPP4BO15327 924 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 SH3BGRLO75368 114 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 LRG1P02750 347 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 ATXN1LP0C7T5 689 aaKnown RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 ACRP10323 421 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF37AP17032 561 aaPredicted RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 XPAP23025 273 aaPredicted RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 PRDX6P30041 224 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 GGT5P36269 586 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 STC1P52823 247 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 SQLEQ14534 574 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
LMNB1-203ENST00000460265 PIANPQ8IYJ0 282 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 AP4S1Q9Y587 144 aa15.25■□□□□ 0.03
LMNB1-203ENST00000460265 TIPRLO75663 272 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 LBPP18428 481 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 HERVK_113P63132 956 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 GRB7Q14451 532 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF678Q5SXM1 525 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 REP15Q6BDI9 236 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 C3orf30Q96M34 536 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms