RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SLC23A2Q9UGH3 650 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 RARRES3Q9UL19 164 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 DNAJC16Q9Y2G8 782 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 PCDHGA9Q9Y5G4 932 aaKnown RBP14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 CACNA1DQ01668 2161 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 CREBBPQ92793 2442 aa14.1□□□□□ -0.15
UPF3AP2-201ENST00000457924 UNC79Q9P2D8 2635 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ANKRD66B4E2M5 251 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 DDX3XO00571 662 aaKnown RBP eCLIP14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 TIAF1O95411 115 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 CCNCP24863 283 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 PTPN4P29074 926 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 CCL11P51671 97 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 RPS15P62841 145 aaKnown RBP14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 NIPAL4Q0D2K0 466 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 TUBB3Q13509 450 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 GPR18Q14330 331 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 PWWP2BQ6NUJ5 590 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ABRAXAS1Q6UWZ7 409 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 SYVN1Q86TM6 617 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 SIDT2Q8NBJ9 832 aaKnown RBP14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 FATE1Q969F0 183 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 CXorf40BQ96DE9 158 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 FCRL4Q96PJ5 515 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 TIMM29Q9BSF4 260 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ZSCAN5AQ9BUG6 496 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ADGRE3Q9BY15 652 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 RAB33BQ9H082 229 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 EPHA6Q9UF33 1036 aa14.09□□□□□ -0.15
UPF3AP2-201ENST00000457924 A1L4Q6 167 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 ARGFXA6NJG6 315 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 SORBS2O94875 1100 aaKnown RBP14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 DDAH2O95865 285 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 HLA-DQB2P05538 268 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 IDSP22304 550 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 IL4RP24394 825 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 RPL10P27635 214 aaKnown RBP14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 PDE1BQ01064 536 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 SLC25A11Q02978 314 aaKnown RBP14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 KLHL30Q0D2K2 578 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 CHAF1BQ13112 559 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 LAPTM4AQ15012 233 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 CPZQ66K79 652 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 NCBP2-AS2Q69YL0 99 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 PDPK2PQ6A1A2 396 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 FAM199XQ6PEV8 388 aaPredicted RBP14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 SASS6Q6UVJ0 657 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 CYP4X1Q8N118 509 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 TRAM1L1Q8N609 369 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 NIPA2Q8N8Q9 360 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 GPR26Q8NDV2 337 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 UBXN4Q92575 508 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 GLYATL1Q969I3 302 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 TSGA13Q96PP4 275 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 ING2Q9H160 280 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 CASS4Q9NQ75 786 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 RAD18Q9NS91 495 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 AIPL1Q9NZN9 384 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 IP6K2Q9UHH9 426 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 ZNF451Q9Y4E5 1061 aa14.08□□□□□ -0.16
UPF3AP2-201ENST00000457924 OR52A4PA6NMU1 304 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 CD48P09326 243 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 RNF224P0DH78 156 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 BRAFP15056 766 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 FOLR1P15328 257 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 VCLP18206 1134 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 PRKCIP41743 596 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 CD86P42081 329 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 ARL4DP49703 201 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 DRG2P55039 364 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 DCDC1P59894 354 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 RPS18P62269 152 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 ACY1Q03154 408 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 PAFAH1B3Q15102 231 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 INPP5JQ15735 1006 aaPredicted RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 CHRNA6Q15825 494 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 HADHQ16836 314 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 PAPD7Q5XG87 772 aaKnown RBP14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 WASH2PQ6VEQ5 465 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 FAM71BQ8TC56 605 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 EID2BQ96D98 161 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 SLC41A2Q96JW4 573 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 RUFY1Q96T51 708 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 NUP85Q9BW27 656 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 SLC29A3Q9BZD2 475 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 ISCUQ9H1K1 167 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 WASH6PQ9NQA3 447 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 DTLQ9NZJ0 730 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 TRIM10Q9UDY6 481 aa14.07□□□□□ -0.16
UPF3AP2-201ENST00000457924 G3BP2Q9UN86 482 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms