RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 OXR1Q8N573 874 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 PATE1Q8WXA2 126 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 FBXO6Q9NRD1 293 aaPredicted RBP13.86□□□□□ -0.19
TIMP1-205ENST00000456754 SIRPGQ9P1W8 387 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 SPASTQ9UBP0 616 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 GULP1Q9UBP9 304 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 H3BM21 787 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 SIGLEC6O43699 453 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 POP7O75817 140 aaKnown RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 S1PR4O95977 384 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 ATP1B2P14415 290 aaPredicted RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 GABRB3P28472 473 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 PGGT1BP53609 377 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CBLBQ13191 982 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 GTF2H3Q13889 308 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 EFTUD2Q15029 972 aaKnown RBP eCLIP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 SEPT7Q16181 437 aaKnown RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 RSPO4Q2I0M5 234 aaPredicted RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CTSL3PQ5NE16 218 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 DBX2Q6ZNG2 339 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 TAF8Q7Z7C8 310 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 LRRTM4Q86VH4 590 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CILP2Q8IUL8 1156 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 GPR161Q8N6U8 529 aaKnown RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 DEFB124Q8NES8 71 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 GPBAR1Q8TDU6 330 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 SETD7Q8WTS6 366 aaKnown RBP13.85□□□□□ -0.19
TIMP1-205ENST00000456754 PYROXD1Q8WU10 500 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 FAM136AQ96C01 138 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CERS2Q96G23 380 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 SGSM3Q96HU1 749 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 KLC4Q9NSK0 619 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 NINJ2Q9NZG7 142 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 TAAR2Q9P1P5 351 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CRYL1Q9Y2S2 319 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 PSAT1Q9Y617 370 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 CFAP54Q96N23 3096 aa13.85□□□□□ -0.19
TIMP1-205ENST00000456754 TRBV23OR9-2A0A075B6M9 112 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 LY6G6EA0A0G2JKS1 128 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 UBA6A0AVT1 1052 aaPredicted RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 CXorf49A8MYA2 514 aaPredicted RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 NDC80O14777 642 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 GIPC1O14908 333 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 EIF3HO15372 352 aaKnown RBP eCLIP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 DFNA5O60443 496 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 SNX2O60749 519 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 C1QAP02745 245 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ZNF883P0CG24 379 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ZNF7P17097 686 aaPredicted RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PAMP19021 973 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 FMO4P31512 558 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ACTR1BP42025 376 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 BLKP51451 505 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ACTR1AP61163 376 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 THOC5Q13769 683 aaKnown RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 NFE2L1Q14494 772 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 KYNUQ16719 465 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 INSCQ1MX18 579 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ERCC6LQ2NKX8 1250 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 TEDDM1Q5T9Z0 273 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 CNSTQ6PJW8 725 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PIP4P1Q86T03 277 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 NAXDQ8IW45 347 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 IFT20Q8IY31 132 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 KYQ8NBH2 561 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 GPR150Q8NGU9 434 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 LPGAT1Q92604 370 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 LRRC39Q96DD0 335 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 FMO2Q99518 471 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 P2RY12Q9H244 342 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 LRRC4CQ9HCJ2 640 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PPANQ9NQ55 473 aaKnown RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PRDM8Q9NQV8 689 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 SCHIP1Q9P0W5 487 aaPredicted RBP13.84□□□□□ -0.19
TIMP1-205ENST00000456754 GALPQ9UBC7 116 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 TBC1D29Q9UFV1 150 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 U3KQA8 63 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 ASXL3Q9C0F0 2248 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PCNX2A6NKB5 2137 aa13.84□□□□□ -0.19
TIMP1-205ENST00000456754 PRAMEF33A0A0G2JMD5 474 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PRR19A6NJB7 356 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 B4DGG1 531 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 LMO7DNF2Z398 122 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 TM4SF5O14894 197 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 KMOO15229 486 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 NIPSNAP2O75323 286 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 NDUFS3O75489 264 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 HAUS5O94927 633 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 TTC4O95801 387 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ANXA6P08133 673 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PMLP29590 882 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PRLHRP49683 370 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 LIMK1P53667 647 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 EIF3BP55884 814 aaKnown RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 VSNL1P62760 191 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms