RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TADA1Q96BN2 335 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 FNIP2Q9P278 1114 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 GALPQ9UBC7 116 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 POLG2Q9UHN1 485 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ANGPT2O15123 496 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF182P17025 639 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ELK4P28324 431 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MERTKQ12866 999 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ACAP2Q15057 778 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MAPRE2Q15555 327 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 RNF219Q5W0B1 726 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 UGT3A1Q6NUS8 523 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF558Q96NG5 402 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CDK15Q96Q40 435 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 INTS7Q9NVH2 962 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ACOX3O15254 700 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TEX28O15482 410 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 GPR39O43194 453 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 GOT2P00505 430 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MBL2P11226 248 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 BMP2P12643 396 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MTHFD2P13995 350 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 GFAPP14136 432 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CD1DP15813 335 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 RXRGP48443 463 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CDKN1CP49918 316 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CYP4F8P98187 520 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TRAP1Q12931 704 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 GPR180Q86V85 440 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 PHYKPLQ8IUZ5 450 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ADGRG5Q8IZF4 528 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 NPLQ9BXD5 320 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MRM3Q9HC36 420 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 AGPAT4Q9NRZ5 378 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CCM2LQ9NUG4 571 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 H3BMQ9 156 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 C1RP00736 705 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 RHOCP08134 193 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 IST1P53990 364 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 OXCT1P55809 520 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 UFM1P61960 85 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 HERVK_113P63132 956 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ATP1A4Q13733 1029 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CXorf57Q6NSI4 855 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TMEM214Q6NUQ4 689 aaKnown RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CCDC117Q8IWD4 279 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 OR6K2Q8NGY2 324 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 LRRC58Q96CX6 371 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 RMDN1Q96DB5 314 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 VPS50Q96JG6 964 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 COG8Q96MW5 612 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 KLF16Q9BXK1 252 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ERVK-6Q9BXR3 956 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 POLR1BQ9H9Y6 1135 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
LINC00959-201ENST00000456581 UBA2Q9UBT2 640 aaPredicted RBP12.29□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 UBA6A0AVT1 1052 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 K7ERQ8 282 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 MAN1A2O60476 641 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CD160O95971 181 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 SERPINF2P08697 491 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 RBP1P09455 135 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 MATN1P21941 496 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CDH4P55283 916 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 RAB39AQ14964 217 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 RPS6KA2Q15349 733 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 ZC3H7AQ8IWR0 971 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 PARP8Q8N3A8 854 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CARNMT1Q8N4J0 409 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF689Q96CS4 500 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 SMG9Q9H0W8 520 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 RPF2Q9H7B2 306 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 PADI4Q9UM07 663 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 AZIN1O14977 448 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms