RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SPATA22Q8NHS9 363 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GDAP1Q8TB36 358 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SSC4DQ8WTU2 575 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GLYATL1Q969I3 302 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CXorf40BQ96DE9 158 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C19orf60Q96EN9 201 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TCTN2Q96GX1 697 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NAP1L5Q96NT1 182 aaPredicted RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AGAP3Q96P47 875 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRIB3Q96RU7 358 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAP3K3Q99759 626 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZPBPQ9BS86 351 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC25A23Q9BV35 468 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CARD9Q9H257 536 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DEF6Q9H4E7 631 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LHX9Q9NQ69 397 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IMP3Q9NV31 184 aaKnown RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PKD2L2Q9NZM6 624 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 VPS4AQ9UN37 437 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PPIL1Q9Y3C6 166 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCDHB3Q9Y5E6 796 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HEY1Q9Y5J3 304 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ADGRG4Q8IZF6 3080 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 A0A087X0T9 212 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LRRD1A4D1F6 860 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TCP11X1B4DZS4 312 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MATN3O15232 486 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ALOX12BO75342 701 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PMPCBO75439 489 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MT-CYBP00156 380 aaPredicted RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM228BP0C875 321 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FGF5P12034 268 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC2A4P14672 509 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PVRP15151 417 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NELFEP18615 380 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DCTP40126 519 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CLCNKAP51800 687 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SEMA5AQ13591 1074 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PEX6Q13608 980 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ATP1A4Q13733 1029 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAP7Q14244 749 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NFE2L1Q14494 772 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PTPRCAPQ14761 206 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC9A5Q14940 896 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PAFAH1B3Q15102 231 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NR6A1Q15406 480 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KYNUQ16719 465 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ATP13A5Q4VNC0 1218 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RALGPS1Q5JS13 557 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DNTTIP2Q5QJE6 756 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCDC122Q5T0U0 273 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FHL5Q5TD97 284 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HGSNATQ68CP4 663 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC6A19Q695T7 634 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SASS6Q6UVJ0 657 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM198BQ6UWH4 519 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C11orf96Q7Z7L8 435 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NT5DC3Q86UY8 548 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LRRTM4Q86VH4 590 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM126BQ8IUX1 230 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LILRA3Q8N6C8 439 aaPredicted RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PLD5Q8N7P1 536 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ENDOVQ8N8Q3 282 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NIPA2Q8N8Q9 360 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SIDT2Q8NBJ9 832 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FDCSPQ8NFU4 85 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRR7Q8TB68 274 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TEKT4Q8WW24 435 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RAPGEF5Q92565 580 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MR1Q95460 341 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SH3KBP1Q96B97 665 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LYSMD1Q96S90 227 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 EFHD1Q9BUP0 239 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NUDT9Q9BW91 350 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GPR63Q9BZJ6 419 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ING2Q9H160 280 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CHST8Q9H2A9 424 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRIT1Q9H3H1 467 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZFYVE1Q9HBF4 777 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC40A1Q9NP59 571 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RTN4Q9NQC3 1192 aaKnown RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FGF21Q9NSA1 209 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 POT1Q9NUX5 634 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANO10Q9NW15 660 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SOHLH2Q9NX45 425 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KCTD5Q9NXV2 234 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ERRFI1Q9UJM3 462 aaPredicted RBP5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HYOU1Q9Y4L1 999 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCDC88CQ9P219 2028 aa5.87□□□□□ -1.47
HLA-DPA3-207ENST00000454398 APCP25054 2843 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANKRD66B4E2M5 251 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCL22O00626 93 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CHUKO15111 745 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF185O15231 689 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A9O60656 530 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SCRG1O75711 98 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CDK14O94921 469 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KRT1P04264 644 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms