RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 KCNMB4Q86W47 210 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GATAD2AQ86YP4 633 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GALNT13Q8IUC8 556 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF547Q8IVP9 402 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF548Q8NEK5 533 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GPR150Q8NGU9 434 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CERS2Q96G23 380 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 DCUN1D1Q96GG9 259 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 OR2M4Q96R27 311 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ROPN1BQ9BZX4 212 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ZCCHC2Q9C0B9 1178 aaKnown RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CLPBQ9H078 707 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 TMEM168Q9H0V1 697 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ACSS3Q9H6R3 686 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 RMI1Q9H9A7 625 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ROPN1Q9HAT0 212 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 DNAAF2Q9NVR5 837 aaKnown RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 FETUBQ9UGM5 382 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 PLEKHM1Q9Y4G2 1056 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 PRSS21Q9Y6M0 314 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 EXOC1LA0A1B0GW35 172 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 GOLGA6L10A6NI86 522 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 OR2AG2A6NM03 316 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 GPR89AB7ZAQ6 455 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 YKT6O15498 198 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 GRID2O43424 1007 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SGTAO43765 313 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 FOXD2O60548 495 aaPredicted RBP12.85□□□□□ -0.35
VPS33A-202ENST00000451053 GPR89BP0CG08 455 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 OGNP20774 298 aaKnown RBP12.85□□□□□ -0.35
VPS33A-202ENST00000451053 PLA2G5P39877 138 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SLC1A2P43004 574 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 BLKP51451 505 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 MGAT5Q09328 741 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 ITIH4Q14624 930 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 PLA2G4EQ3MJ16 856 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 PRRT3Q5FWE3 981 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 LYPLAL1Q5VWZ2 237 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 MRNIPQ6NTE8 343 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 TMEM220Q6QAJ8 160 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 PACS1Q6VY07 963 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 CERS6Q6ZMG9 384 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 LRRTM4Q86VH4 590 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 CILP2Q8IUL8 1156 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 DENND6AQ8IWF6 608 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 CLDN19Q8N6F1 224 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 LMX1AQ8TE12 382 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 FAM122AQ96E09 287 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SGF29Q96ES7 293 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 ZIM3Q96PE6 472 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 FAM167BQ9BTA0 163 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 IARS2Q9NSE4 1012 aaKnown RBP12.85□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 NSMCE4AQ9NXX6 385 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 MOCS1Q9NZB8 636 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SLC17A6Q9P2U8 582 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 ST14Q9Y5Y6 855 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
VPS33A-202ENST00000451053 C4orf47A7E2U8 309 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 AQP9O43315 295 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 OPA1O60313 960 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 NDUFS3O75489 264 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 TCEA3O75764 348 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF883P0CG24 379 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 RALBP11234 206 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 CTSEP14091 401 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 ATP1B2P14415 290 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 DGKAP23743 735 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 PMLP29590 882 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 TTPAP49638 278 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 MPP1Q00013 466 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 CTBSQ01459 385 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 CTBP1Q13363 440 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF789Q5FWF6 425 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 CHST15Q7LFX5 561 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 C11orf96Q7Z7L8 435 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 SDCCAG8Q86SQ7 713 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 NRROSQ86YC3 692 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms