RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ZNF398Q8TD17 642 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 RAB33BQ9H082 229 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 OSGEPL1Q9H4B0 414 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 CPNE5Q9HCH3 593 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 BPIFA1Q9NP55 256 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 TMPRSS11EQ9UL52 423 aa15.78■□□□□ 0.12
SGCE-208ENST00000450385 COL6A6A6NMZ7 2263 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 TRBV23OR9-2A0A075B6M9 112 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 PMS2P1A4D2B8 440 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 AGAP14A8MT82 685 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 CAPN5O15484 640 aaPredicted RBP15.77■□□□□ 0.12
SGCE-208ENST00000450385 AGTP01019 485 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 SLC4A1P02730 911 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ITGB2P05107 769 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ITIH1P19827 911 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.12
SGCE-208ENST00000450385 MAPK10P53779 464 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 GSDMDP57764 484 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 MC2RQ01718 297 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 NFATC2Q13469 925 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 CHRNA6Q15825 494 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 PARP6Q2NL67 630 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 P3H1Q32P28 736 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 NKAIN2Q5VXU1 208 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 CEACAM20Q6UY09 585 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 C11orf96Q7Z7L8 435 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 TRAPPC5Q8IUR0 188 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ACRBPQ8NEB7 543 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 NCSTNQ92542 709 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ALG3Q92685 438 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ULK4Q96C45 1275 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 BBC3Q96PG8 261 aaPredicted RBP15.77■□□□□ 0.12
SGCE-208ENST00000450385 TRIT1Q9H3H1 467 aaKnown RBP15.77■□□□□ 0.12
SGCE-208ENST00000450385 SLC40A1Q9NP59 571 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 PRDM8Q9NQV8 689 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 EPHA6Q9UF33 1036 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 SLC23A2Q9UGH3 650 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 ACSL5Q9ULC5 683 aa15.77■□□□□ 0.12
SGCE-208ENST00000450385 MN1Q10571 1320 aaPredicted RBP15.76■□□□□ 0.11
SGCE-208ENST00000450385 KRT86O43790 486 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 C9P02748 559 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 RALBP11234 206 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 CSF2RBP32927 897 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 ETV5P41161 510 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 SLC19A1P41440 591 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 CHRNA4P43681 627 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 ATP1A2P50993 1020 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 KLF1Q13351 362 aaPredicted RBP15.76■□□□□ 0.11
SGCE-208ENST00000450385 GPR33Q49SQ1 333 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 MANEAQ5SRI9 462 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 KLHL35Q6PF15 583 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 RCBTB1Q8NDN9 531 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 SGF29Q96ES7 293 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 LINC00615Q96LM1 132 aaPredicted RBP15.76■□□□□ 0.11
SGCE-208ENST00000450385 EFHD1Q9BUP0 239 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 SLC39A1Q9NY26 324 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 SDK2Q58EX2 2172 aa15.76■□□□□ 0.11
SGCE-208ENST00000450385 MACROD2A1Z1Q3 448 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 ERI2A8K979 691 aaKnown RBP15.75■□□□□ 0.11
SGCE-208ENST00000450385 PDZK1P1A8MUH7 402 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 UBXN7O94888 489 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 GSTM1P09488 218 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 SFTPCP11686 197 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 CCL4P13236 92 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 MSH3P20585 1137 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 PPM1FP49593 454 aaPredicted RBP15.75■□□□□ 0.11
SGCE-208ENST00000450385 GSTM4Q03013 218 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 MSLNQ13421 630 aaPredicted RBP15.75■□□□□ 0.11
SGCE-208ENST00000450385 LAMB3Q13751 1172 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 TAF1BQ53T94 588 aaPredicted RBP15.75■□□□□ 0.11
SGCE-208ENST00000450385 METRNLQ641Q3 311 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 CRTC3Q6UUV7 619 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 FAM151BQ6UXP7 276 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 BMPERQ8N8U9 685 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 TTC9Q92623 222 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 CXorf40BQ96DE9 158 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 ZDHHC12Q96GR4 267 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 FICDQ9BVA6 458 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 LRRC40Q9H9A6 602 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 ARFGAP3Q9NP61 516 aa15.75■□□□□ 0.11
SGCE-208ENST00000450385 ZNF624Q9P2J8 865 aaPredicted RBP15.75■□□□□ 0.11
SGCE-208ENST00000450385 C17orf113A0A1B0GUU1 675 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 CFAP99D6REC4 459 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 H7C0S8 307 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 GAPDHSO14556 408 aaPredicted RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 POP7O75817 140 aaKnown RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 SRP72O76094 671 aaKnown RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 PRAMEF1O95521 474 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 AMD1P17707 334 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 MAP4P27816 1152 aaKnown RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 PSMB4P28070 264 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 IL11RAQ14626 422 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 BCL7AQ4VC05 210 aa15.74■□□□□ 0.11
SGCE-208ENST00000450385 KHDC1Q4VXA5 237 aaKnown RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 ZNF648Q5T619 568 aaPredicted RBP15.74■□□□□ 0.11
SGCE-208ENST00000450385 GPRC6AQ5T6X5 926 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms